Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
Amino acid alignment: BSNT_02575 and RBAM_015470

See DNA alignment / Visit BSNT_02575 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:24
# Commandline: needle
#    -asequence pep-align/BSNT_02575___yloA.1.9828.seq
#    -bsequence pep-align/RBAM_015470___yloA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02575___yloA-RBAM_015470___yloA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02575___yloA-RBAM_015470___yloA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02575___yloA
# 2: RBAM_015470___yloA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 570
# Identity:     492/570 (86.3%)
# Similarity:   526/570 (92.3%)
# Gaps:           2/570 ( 0.4%)
# Score: 2568.0
# 
#
#=======================================

BSNT_02575___      1 MSFDGMFTYGMTHELNEKIMGGRITKVHQPYKHDVIFHIRAKGKNQKLLL     50
                     ||||||||||||||||.:|.|||||:||||:||||||||||.|||.||||
RBAM_015470__      1 MSFDGMFTYGMTHELNNRIAGGRITRVHQPFKHDVIFHIRANGKNHKLLL     50

BSNT_02575___     51 SAHPSYSRVHITAQAYENPSEPPMFCMLLRKHIEGGFIEKIEQAGLDRIM    100
                     ||||||||||:|.|||||||||||||||||||||||||||||||||||||
RBAM_015470__     51 SAHPSYSRVHMTNQAYENPSEPPMFCMLLRKHIEGGFIEKIEQAGLDRIM    100

BSNT_02575___    101 IFHIKSRNEIGDETVRKLYVEIMGRHSNIILTDAAENVIIDGLKHLSPSM    150
                     ||.|||||||||||||.|||||||||||||||| .|..||||||||||||
RBAM_015470__    101 IFRIKSRNEIGDETVRTLYVEIMGRHSNIILTD-GEGAIIDGLKHLSPSM    149

BSNT_02575___    151 NSYRTVLPGQDYKLPPAQDKISPLEASEDDILRHLSFQEGKLDKQIVDHF    200
                     |||||||||.||||||||:|||||.|.|:|:||:||||||:||:|||.||
RBAM_015470__    150 NSYRTVLPGYDYKLPPAQEKISPLAADEEDVLRYLSFQEGRLDQQIVRHF    199

BSNT_02575___    201 SGVSPLFAKEAVHRAGLANKVTLPKALLALFAEVKEHRFIPNITTVNGKE    250
                     ||||||||||||||||||||:||||.|:.:|..||:.||.|||||..|||
RBAM_015470__    200 SGVSPLFAKEAVHRAGLANKITLPKTLIEMFHAVKDCRFTPNITTAGGKE    249

BSNT_02575___    251 YFYLLELTHLKGEARSFESLSELLDRFYFGKAERDRVKQQAQDLERFVVN    300
                     |||||.|||:.||.|:|.||||||||||||||||||||||||||||||.|
RBAM_015470__    250 YFYLLSLTHVNGEERTFHSLSELLDRFYFGKAERDRVKQQAQDLERFVAN    299

BSNT_02575___    301 ERKKNANKIKKLEKTLEYSENAKEFQLYGELLTANLYMLKKGDKQAEVIN    350
                     ||||||||||||||||:|||||||||||||||||||||||||||:|||||
RBAM_015470__    300 ERKKNANKIKKLEKTLDYSENAKEFQLYGELLTANLYMLKKGDKEAEVIN    349

BSNT_02575___    351 YYDEESPTITIPLNPNKTPSENAQAYFTKYQKAKNSVAVVEEQIRLAQEE    400
                     ||||||.|:|||||||||||||||.||||||||||||.||::|||||:||
RBAM_015470__    350 YYDEESKTVTIPLNPNKTPSENAQMYFTKYQKAKNSVEVVKQQIRLAEEE    399

BSNT_02575___    401 IEYFDQLIQQLSSASPRDISEIREELVEGKYLRPKQQKGQKKQKPHNPVL    450
                     |.|||||||||||||.:||.|||||||||||||||||:||||||.|.|||
RBAM_015470__    400 IAYFDQLIQQLSSASTKDIHEIREELVEGKYLRPKQQRGQKKQKQHVPVL    449

BSNT_02575___    451 ETYESTSGLTILVGKNNRQNEYLTTRVAARDDIWLHTKDIPGSHVVIRSS    500
                     |.|||:.||||||||||:|||||||:.|||||:|.||||||||||||:|:
RBAM_015470__    450 EQYESSRGLTILVGKNNKQNEYLTTKAAARDDLWFHTKDIPGSHVVIKSN    499

BSNT_02575___    501 EPDEQTIMEAATIAAYFSKAKDSSSVPVDYTKIRHVKKPNGAKPGFVTYD    550
                     :||||:|:|||.|||||||||||.||||||||||||||||||||||||||
RBAM_015470__    500 DPDEQSILEAAAIAAYFSKAKDSGSVPVDYTKIRHVKKPNGAKPGFVTYD    549

BSNT_02575___    551 SQHTVFVTPDADTVIKLKKS    570
                     ||||||||||||.||:||| 
RBAM_015470__    550 SQHTVFVTPDADLVIRLKK-    568


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_02575 and RBAM_015470

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
