Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02575 and RBAM_015470
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:24
# Commandline: needle
# -asequence dna-align/BSNT_02575___yloA.1.9828.seq
# -bsequence dna-align/RBAM_015470___yloA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02575___yloA-RBAM_015470___yloA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02575___yloA-RBAM_015470___yloA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02575___yloA
# 2: RBAM_015470___yloA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1730
# Identity: 1342/1730 (77.6%)
# Similarity: 1342/1730 (77.6%)
# Gaps: 40/1730 ( 2.3%)
# Score: 5117.5
#
#
#=======================================
BSNT_02575___ 1 ATGTCGTTTGATGGCATGTTTACATACGGAATGACACACGAACTTAACGA 50
|||||.||||||||||||||||||||||||||||||||.|||.|.|||
RBAM_015470__ 1 ATGTCTTTTGATGGCATGTTTACATACGGAATGACACATGAATTAAAC-- 48
BSNT_02575___ 51 GAAAATAATGGGCGGA---CGAATTACAAAAGTCCATCAGCCATATAAGC 97
||....||.|.|||| ||.|||||.|.||||||||||||.|.|||||
RBAM_015470__ 49 -AACCGGATCGCCGGAGGCCGGATTACGAGAGTCCATCAGCCTTTTAAGC 97
BSNT_02575___ 98 ACGATGTGATTTTCCACATCCGTGCCAAGGGAAAAAACCAAAAACTATTA 147
||||||||||.||.||.|||||.||.||.|||||||||||.|||.|||||
RBAM_015470__ 98 ACGATGTGATATTTCATATCCGCGCTAACGGAAAAAACCATAAATTATTA 147
BSNT_02575___ 148 TTATCGGCACATCCGAGCTATTCACGGGTGCATATCACGGCACAAGCTTA 197
||||||||.|||||||||||||||||||||||.||.||....||.||.||
RBAM_015470__ 148 TTATCGGCGCATCCGAGCTATTCACGGGTGCACATGACAAACCAGGCCTA 197
BSNT_02575___ 198 TGAAAATCCAAGCGAACCTCCAATGTTTTGCATGTTGCTGAGAAAGCATA 247
|||||||||.|||||.||.||.||||||||.|||.||||.||||||||||
RBAM_015470__ 198 TGAAAATCCGAGCGAGCCGCCGATGTTTTGTATGCTGCTCAGAAAGCATA 247
BSNT_02575___ 248 TCGAAGGCGGATTCATTGAGAAAATTGAACAAGCGGGCTTAGACCGCATT 297
|.|||||||||||.|||||||||||.|||||.||.||.||||||||.|||
RBAM_015470__ 248 TAGAAGGCGGATTTATTGAGAAAATAGAACAGGCCGGATTAGACCGGATT 297
BSNT_02575___ 298 ATGATTTTTCATATCAAAAGCCGAAACGAAATTGGCGATGAAACCGTACG 347
|||||.||.|..||.||||||.||||.|||||.|||||.||||||||..|
RBAM_015470__ 298 ATGATATTCCGGATAAAAAGCAGAAATGAAATCGGCGACGAAACCGTCAG 347
BSNT_02575___ 348 AAAGCTTTATGTAGAAATTATGGGCCGCCACAGCAATATCATTTTGACTG 397
||..||.|||||.|||||||||||.||.|||||||||||.|||.||||||
RBAM_015470__ 348 AACACTGTATGTGGAAATTATGGGACGGCACAGCAATATTATTCTGACTG 397
BSNT_02575___ 398 ACGCAGCAGAAAATGTGATCATCGACGGACTTAAGCACTTATCACCGTCA 447
|||.||.||.| |..|||||||||||.||.||.||.|||||.|||||.
RBAM_015470__ 398 ACGGAGAAGGA---GCCATCATCGACGGGCTGAAACATTTATCTCCGTCG 444
BSNT_02575___ 448 ATGAACAGCTACCGTACAGTACTGCCCGGCCAAGATTATAAGCTTCCGCC 497
||||||||||||||.||.||.|||||.|||.|.|||||.||||||||.||
RBAM_015470__ 445 ATGAACAGCTACCGGACCGTTCTGCCGGGCTATGATTACAAGCTTCCTCC 494
BSNT_02575___ 498 TGCCCAGGACAAAATATCGCCTCTTGAGGCGTCAGAAGATGATATTTTGC 547
.||.|||||.|||||.|||||.||||..|||...|||||.||..||||||
RBAM_015470__ 495 CGCTCAGGAAAAAATTTCGCCGCTTGCCGCGGATGAAGAGGACGTTTTGC 544
BSNT_02575___ 548 GTCACCTCAGCTTTCAAGAAGGAAAGCTTGATAAACAAATTGTC-GACCA 596
||.|.|||||.|||||.||||||..||||||..|.||.||.||| || ||
RBAM_015470__ 545 GTTATCTCAGTTTTCAGGAAGGACGGCTTGACCAGCAGATCGTCAGA-CA 593
BSNT_02575___ 597 CTTTTCAGGGGTGTCTCCGCTTTTCGCCAAAGAAGCGGTTCACAGAGCAG 646
|||.||.||.||.||||||||.||.||.||||||||.||.||||||||.|
RBAM_015470__ 594 CTTCTCCGGTGTTTCTCCGCTGTTTGCAAAAGAAGCCGTGCACAGAGCGG 643
BSNT_02575___ 647 GCCTTGCCAACAAAGTCACACTGCCAAAAGCATTGCTGGCACTGTT---T 693
|.||.||.||||||.|.||.|||||.||..|..||.|.|.|.|||| |
RBAM_015470__ 644 GTCTCGCTAACAAAATAACGCTGCCGAAGACGCTGATTGAAATGTTCCAT 693
BSNT_02575___ 694 GCCGAAGTGAAAGA--GCACCGTTT-CATTCCCAACATTACGACTGTAAA 740
||| |||||||| ||| .|||| || ||.|||||||||||.|....
RBAM_015470__ 694 GCC---GTGAAAGATTGCA-GGTTTACA--CCGAACATTACGACAGCCGG 737
BSNT_02575___ 741 CGGAAAGGAATATTTTTATCTGCTGGAGCTGACTCATCTAAAGGGCGAAG 790
||||||||||||.||||||||.|||...||.||.|||.||||.||.||.|
RBAM_015470__ 738 CGGAAAGGAATACTTTTATCTCCTGTCTCTCACACATGTAAACGGAGAGG 787
BSNT_02575___ 791 CGCGCAGTTTTGAGTCATTAAGCGAACTGCTCGACCGTTTTTATTTCGGA 840
.|||||..|||.|.|||.|.||.||.|||.|.|||||.|||||||||||.
RBAM_015470__ 788 AGCGCACCTTTCACTCACTGAGTGAGCTGTTGGACCGGTTTTATTTCGGC 837
BSNT_02575___ 841 AAAGCTGAACGAGACCGGGTCAAGCAACAGGCTCAGGATCTTGAGCGTTT 890
||.||.|||||.|||||.|||||.||.||||||||||||||.|||||.||
RBAM_015470__ 838 AAGGCGGAACGCGACCGCGTCAAACAGCAGGCTCAGGATCTCGAGCGGTT 887
BSNT_02575___ 891 TGTTGTGAACGAACGGAAGAAGAATGCCAACAAAATCAAAAAATTAGAGA 940
|||.|..||.||||||||.|||||.|||||.||.||.|||||..|.||.|
RBAM_015470__ 888 TGTCGCAAATGAACGGAAAAAGAACGCCAATAAGATAAAAAAGCTGGAAA 937
BSNT_02575___ 941 AAACCCTGGAGTATTCGGAAAACGCGAAGGAATTTCAGCTTTACGGAGAG 990
|.||.||.||.||.||.|||||.|||||||||||.|||||.|||||.||.
RBAM_015470__ 938 AGACGCTCGACTACTCAGAAAATGCGAAGGAATTCCAGCTATACGGCGAA 987
BSNT_02575___ 991 CTTTTAACCGCTAATTTATATATGCTGAAAAAAGGTGATAAACAGGCTGA 1040
||..|.||.||.|||||.||||||||||||||||||||.|||.|.||.||
RBAM_015470__ 988 CTGCTGACGGCGAATTTGTATATGCTGAAAAAAGGTGACAAAGAAGCGGA 1037
BSNT_02575___ 1041 GGTCATCAATTATTATGATGAAGAAAGCCCGACAATCACGATTCCTTTAA 1090
.||||||||||||||||||||||||||...||||.|.||.||.|||||||
RBAM_015470__ 1038 AGTCATCAATTATTATGATGAAGAAAGTAAGACAGTGACCATCCCTTTAA 1087
BSNT_02575___ 1091 ACCCGAACAAAACGCCTTCTGAAAACGCACAGGCCTATTTCACGAAGTAT 1140
|.|||||||||||.||.||.||||||||.|||...|||||.||.|||||.
RBAM_015470__ 1088 ATCCGAACAAAACACCGTCAGAAAACGCGCAGATGTATTTTACAAAGTAC 1137
BSNT_02575___ 1141 CAGAAAGCGAAAAATTCGGTCGCAGTTGTCGAGGAGCAAATCAGGCTGGC 1190
||.||.|||||.|||||.||||..||.||..|..|.||.|||.|.|||||
RBAM_015470__ 1138 CAAAAGGCGAAGAATTCCGTCGAGGTGGTAAAACAACAGATCCGTCTGGC 1187
BSNT_02575___ 1191 ACAGGAAGAGATCGAATATTTTGATCAGCTGATTCAGCAGCTTTCGTCCG 1240
..||||.||.||||..|||||.|||||||||||.||||||||.||.||||
RBAM_015470__ 1188 CGAGGAGGAAATCGCTTATTTCGATCAGCTGATCCAGCAGCTCTCCTCCG 1237
BSNT_02575___ 1241 CTTCTCCCC--GGGATA-TCAGCGAAATCAGGGAAGAGCTTGTAGAGGGC 1287
| ||||.| .||||| ||| ||||||.|||||.||||||||.||.|||
RBAM_015470__ 1238 C--CTCCACAAAGGATATTCA-CGAAATAAGGGAGGAGCTTGTGGAAGGC 1284
BSNT_02575___ 1288 AAATATTTACGCCCTAAGCAGCAAAAAGGCCAGAAAAAGCAAAAACCGCA 1337
||||||.|.||.||.||.|||||...|||.||||||||.||.||.|.|||
RBAM_015470__ 1285 AAATATCTGCGACCGAAACAGCAGCGAGGACAGAAAAAACAGAAGCAGCA 1334
BSNT_02575___ 1338 CAATCCGGTGTTAGAAACATATGAATC--CACCTCAGGG--CTGACAATT 1383
|..|||.||.||.||...||||||||| ||| ||| .||||.|||
RBAM_015470__ 1335 CGTTCCTGTTTTGGAGCAATATGAATCTTCAC----GGGGATTGACGATT 1380
BSNT_02575___ 1384 TTAGTGGGTAAGAACAATCGTCAAAATGAATATTTAACGACAAGAGTGGC 1433
.|.||.||.||.||||||...||||||||.||.||||||||||.||..||
RBAM_015470__ 1381 CTTGTCGGCAAAAACAATAAACAAAATGAGTACTTAACGACAAAAGCTGC 1430
BSNT_02575___ 1434 GGCCAGAGACGATATCTGGCTTCACACGAAGGACATTCCAGGCTCCCACG 1483
.||.||.||.|||.|.|||.|.||||||||.||||||||.||.|||||||
RBAM_015470__ 1431 CGCAAGGGATGATTTATGGTTCCACACGAAAGACATTCCGGGTTCCCACG 1480
BSNT_02575___ 1484 TTGTGATCAGAAGCAGCGAACCGGATGAGCAAACAATCATGGAAGCCGCG 1533
|||||||.|.|||||.|||.||||||||.|||.|.||..||||.||.||.
RBAM_015470__ 1481 TTGTGATTAAAAGCAACGATCCGGATGAACAATCCATACTGGAGGCGGCT 1530
BSNT_02575___ 1534 ACAATTGCAGCTTATTTTTCAAAAGCTAAAGATTCAAGTTCAGTGCCTGT 1583
.|.||.||.|||||||||||.||.||.||||||||..|.||.||.||.||
RBAM_015470__ 1531 GCGATCGCCGCTTATTTTTCCAAGGCGAAAGATTCCGGCTCCGTTCCCGT 1580
BSNT_02575___ 1584 AGATTATACAAAAATCAGGCATGTCAAAAAACCAAACGGCGCGAAACCCG 1633
.|||||||||||||||||.||.||.|||||.|||||||||||.||.||||
RBAM_015470__ 1581 TGATTATACAAAAATCAGACACGTGAAAAAGCCAAACGGCGCAAAGCCCG 1630
BSNT_02575___ 1634 GTTTCGTCACCTATGACAGCCAGCATACCGTCTTTGTCACGCCTGATGCT 1683
|.||.||||||||||||||||||||||||||.||||||||.||||||||.
RBAM_015470__ 1631 GATTTGTCACCTATGACAGCCAGCATACCGTATTTGTCACACCTGATGCC 1680
BSNT_02575___ 1684 GATACTGTCATCAAGCTCAAAAAAAGCTGA 1713
||...||||||...|||.|||||| |.|
RBAM_015470__ 1681 GACCTTGTCATACGGCTGAAAAAA---TAA 1707
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