Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02571 and RBAM_015450

See DNA alignment / Visit BSNT_02571 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:23
# Commandline: needle
#    -asequence pep-align/BSNT_02571___ylnE.1.9828.seq
#    -bsequence pep-align/RBAM_015450___sirB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02571___ylnE-RBAM_015450___sirB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02571___ylnE-RBAM_015450___sirB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02571___ylnE
# 2: RBAM_015450___sirB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity:     183/261 (70.1%)
# Similarity:   218/261 (83.5%)
# Gaps:           0/261 ( 0.0%)
# Score: 982.0
# 
#
#=======================================

BSNT_02571___      1 MKQAILYVGHGSRVKKAQQEAAAFLEGCKAHISVPVQEISFLELQEPTIE     50
                     |||||||:|||||:||||.|:||||:||..|...|:|||.|||||||:||
RBAM_015450__      1 MKQAILYIGHGSRMKKAQTESAAFLKGCMPHADAPIQEICFLELQEPSIE     50

BSNT_02571___     51 TGFEACVKQGATHIAVVPLLLLTAAHAKHDIPEEIARAASRYPSVRISYG    100
                     .||||||:|||||||.||||||||||||||||.||||||:.:|.::::||
RBAM_015450__     51 AGFEACVRQGATHIAAVPLLLLTAAHAKHDIPAEIARAAALHPDIKVTYG    100

BSNT_02571___    101 KPIGIDEEVVKAVYHRMKDIGVPYENARVVLIGRGSSDPDVKRDVTGIAN    150
                     .|||:|:||||||:||::|.|||.|.|:||||||||:||.||..|:.||.
RBAM_015450__    101 VPIGVDDEVVKAVHHRIEDTGVPIEQAKVVLIGRGSTDPAVKNAVSEIAG    150

BSNT_02571___    151 LLQEMIPVKEVIPCFLTACGPNYKEVFSELKKDDGITTFIVPYLLFTGML    200
                     .|:.:.|||||||||||||.|:|||||:.|::|||...||||||||||:|
RBAM_015450__    151 KLEAITPVKEVIPCFLTACDPHYKEVFAGLEEDDGAPVFIVPYLLFTGLL    200

BSNT_02571___    201 MNEIEREVQKLKAHNPNVYLSSYIGFHPHVKNAFLNRVRETAANSEGQFD    250
                     |.|||||||||:..|.||:|:||:|||||:|.||||||.|...|..||||
RBAM_015450__    201 MTEIEREVQKLQTVNQNVHLASYLGFHPHIKQAFLNRVSEAVRNPGGQFD    250

BSNT_02571___    251 FDGDSYASAAH    261
                     |.|..||::||
RBAM_015450__    251 FKGGQYAASAH    261


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