Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02563 and RBAM_015390
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:23
# Commandline: needle
# -asequence pep-align/BSNT_02563___pyrE.1.9828.seq
# -bsequence pep-align/RBAM_015390___pyrE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02563___pyrE-RBAM_015390___pyrE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02563___pyrE-RBAM_015390___pyrE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02563___pyrE
# 2: RBAM_015390___pyrE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 216
# Identity: 178/216 (82.4%)
# Similarity: 193/216 (89.4%)
# Gaps: 6/216 ( 2.8%)
# Score: 944.0
#
#
#=======================================
BSNT_02563___ 1 ------MKQIIAKHLLDIQAVFLRPNEPFTWASGILSPIYCDNRLTLSFP 44
|||.||||||.|:|||||||||||||||||||||||||||||:|
RBAM_015390__ 1 MGGRSPMKQAIAKHLLHIEAVFLRPNEPFTWASGILSPIYCDNRLTLSYP 50
BSNT_02563___ 45 EVRNDVASGISKLVKEHFPEAEMIAGTATAGIPHAALAADRLNLPMCYVR 94
:||||||.|:.||:|||||||||||||||||||||||.|||...||||||
RBAM_015390__ 51 KVRNDVADGLGKLLKEHFPEAEMIAGTATAGIPHAALLADRTGAPMCYVR 100
BSNT_02563___ 95 SKPKTHGKGNQIEGAVQEGQKTVVIEDLISTGGSVLEACAALQAAGCEVL 144
||||.||||||||||:::||||||||||||||||||||.||||..|.|||
RBAM_015390__ 101 SKPKAHGKGNQIEGAIKKGQKTVVIEDLISTGGSVLEAAAALQREGAEVL 150
BSNT_02563___ 145 GVVSIFTYGLPKAEEAFAKAELPYYSLTDYDTLTEVALENGNIHSNDLKK 194
||:||||||||||:|||.||.||||||||||||.|||||||.|||:|::|
RBAM_015390__ 151 GVISIFTYGLPKAKEAFKKAGLPYYSLTDYDTLIEVALENGTIHSDDIEK 200
BSNT_02563___ 195 LQTWKQNPESKDWFKK 210
|::|||||||||||||
RBAM_015390__ 201 LKSWKQNPESKDWFKK 216
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