Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02562 and RBAM_015380

See DNA alignment / Visit BSNT_02562 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:23
# Commandline: needle
#    -asequence pep-align/BSNT_02562___pyrF.1.9828.seq
#    -bsequence pep-align/RBAM_015380___pyrF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02562___pyrF-RBAM_015380___pyrF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02562___pyrF-RBAM_015380___pyrF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02562___pyrF
# 2: RBAM_015380___pyrF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 239
# Identity:     189/239 (79.1%)
# Similarity:   215/239 (90.0%)
# Gaps:           1/239 ( 0.4%)
# Score: 972.0
# 
#
#=======================================

BSNT_02562___      1 MKNNLPIIALDFASAEETLAFLAPFQQEPLFVKVGMELFYQEGPSIVKQL     50
                     ||||||||||||||.||||.||..|::|.||||.||||||||||:|:.||
RBAM_015380__      1 MKNNLPIIALDFASGEETLTFLDLFEKERLFVKTGMELFYQEGPAIIHQL     50

BSNT_02562___     51 KERNCELFLDLKLHDIPTTVNKAMKRLASLGVDLVNVHAAGGKKMMQAAL    100
                     |||||::|||||||||||||||||||||.|||||||||||||.:||:|||
RBAM_015380__     51 KERNCDIFLDLKLHDIPTTVNKAMKRLAGLGVDLVNVHAAGGARMMRAAL    100

BSNT_02562___    101 EGLEEGTPAGKKRPSLIAVTQLTSTSEQIMKDELLIEKSLIDTVVHYSKK    150
                     ||||||||||:||||||||||| |||||:.|:|||:.|.|::|||||.|.
RBAM_015380__    101 EGLEEGTPAGRKRPSLIAVTQL-STSEQVAKEELLLHKPLLETVVHYGKM    149

BSNT_02562___    151 AEESGLDGVVCSVHEAKAIYQAVSPSFLTVTPGIRMSEDAANDQVRVATP    200
                     |||.|||||||||||.||||:||.|||||||||||.:.|||:||||.|||
RBAM_015380__    150 AEECGLDGVVCSVHETKAIYEAVRPSFLTVTPGIRTASDAADDQVRTATP    199

BSNT_02562___    201 AIAREKGSSAIVVGRSITKAEDPVKAYKAVRLEWEGIKS    239
                     :.|:|.|||||||||||||||:||:||:|::|||||::.
RBAM_015380__    200 SFAKENGSSAIVVGRSITKAENPVEAYEAIKLEWEGVRR    238


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