Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02562 and RBAM_015380
See
Amino acid alignment /
Visit
BSNT_02562 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:23
# Commandline: needle
# -asequence dna-align/BSNT_02562___pyrF.1.9828.seq
# -bsequence dna-align/RBAM_015380___pyrF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02562___pyrF-RBAM_015380___pyrF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02562___pyrF-RBAM_015380___pyrF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02562___pyrF
# 2: RBAM_015380___pyrF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 737
# Identity: 555/737 (75.3%)
# Similarity: 555/737 (75.3%)
# Gaps: 37/737 ( 5.0%)
# Score: 2015.0
#
#
#=======================================
BSNT_02562___ 1 ATGAAAAACAACCTGCCCATCATCGCGCTTGATTTTGCATCAGCTGAAGA 50
|||||||||||||||||||||||||||||||||||||||||||..|||||
RBAM_015380__ 1 ATGAAAAACAACCTGCCCATCATCGCGCTTGATTTTGCATCAGGGGAAGA 50
BSNT_02562___ 51 AACACTTGCGTTCTTAGCGCCT--TTTCAGCAAGAACCGTTATTTGT--A 96
.||..|..||||.||| |.|| |||.|..|.|||..|.|.||||| |
RBAM_015380__ 51 GACTTTAACGTTTTTA--GACTTGTTTGAAAAGGAAAGGCTTTTTGTCAA 98
BSNT_02562___ 97 AAGGTTGGAATGGAGCTTTTTTATCAAGAAGG----GCCATCGATCGTGA 142
||.| ||.|||||.|||||||||||.||||| ||||||..||
RBAM_015380__ 99 AACG--GGGATGGAACTTTTTTATCAGGAAGGCCCCGCCATCATTC---- 142
BSNT_02562___ 143 AACAATTAAAAGAAAGAAACTGTGAGCTGTTTTTAGATCTAAAGCTTCAT 192
|.||||||||||||.|.||||||||..|.|||||||||.|||||||||||
RBAM_015380__ 143 ACCAATTAAAAGAACGGAACTGTGATATATTTTTAGATTTAAAGCTTCAT 192
BSNT_02562___ 193 GACATCCCGACTACTGTAAACAAAGCGATGAAGCGCCTTGCCAGTCTCGG 242
||.|||||||||||.||.||.||||||||||||||.||.|||.|.|||||
RBAM_015380__ 193 GATATCCCGACTACGGTCAATAAAGCGATGAAGCGGCTGGCCGGCCTCGG 242
BSNT_02562___ 243 AGTAGATCTCGTCAATGTTCATGCTGCTGGGGGCAAAAAAATGATGCAGG 292
.||.||||||||||||||.|||||.||.||||||..|...|||||||..|
RBAM_015380__ 243 CGTTGATCTCGTCAATGTGCATGCGGCAGGGGGCGCACGCATGATGCGTG 292
BSNT_02562___ 293 CAGCTCTCGAAGG-CTTAGAAGAAGGTACGCCGGCTGGAAAAAAACGTCC 341
|.||.||.||.|| ||| ||||||||.||||||||.||.|.||||||.||
RBAM_015380__ 293 CGGCCCTTGAGGGACTT-GAAGAAGGCACGCCGGCAGGCAGAAAACGCCC 341
BSNT_02562___ 342 GTCACTTATCGCGGTAACCCAGCTGACAAGCACATCTGAACAAATCATGA 391
|||..|.||||||||.||.||||| .|||||.||.||.||..|...||
RBAM_015380__ 342 GTCTTTAATCGCGGTGACTCAGCT---CAGCACTTCAGAGCAGGTGGCGA 388
BSNT_02562___ 392 AAGATGAACTGCTGATCGAAAAGTCTCTGATTGATACGGTTGTGCACTAC 441
|.||.||.||.|||.|..|.|||.|.|||.|.||.|||||||||||.|||
RBAM_015380__ 389 AGGAAGAGCTTCTGCTGCATAAGCCGCTGTTAGAAACGGTTGTGCATTAC 438
BSNT_02562___ 442 AGCAAAAAGGCGGAAGAAAGCGGACTGGATGGAGTGGTCTGCTCTGTTCA 491
.||||||.|||||||||..||||.|||||.||||||||.||.||.||.||
RBAM_015380__ 439 GGCAAAATGGCGGAAGAGTGCGGGCTGGACGGAGTGGTATGTTCGGTACA 488
BSNT_02562___ 492 TGAAGCAAAAGCCATTTACCAAGCGGTGTCGCCTTCATTTCTGACTGTCA 541
||||.|||||||||||||..|||||||...|||||||||||||||.||||
RBAM_015380__ 489 TGAAACAAAAGCCATTTATGAAGCGGTCCGGCCTTCATTTCTGACAGTCA 538
BSNT_02562___ 542 CTCCGGGGATCAGAATGTCTGAG-GACGCTGCGAATGACCAAGTCCG--C 588
|.||.||.|||.|.|.|.| .|| |||||.||..|.||.|||||||| |
RBAM_015380__ 539 CACCAGGCATCCGCACGGC-CAGTGACGCAGCTGACGATCAAGTCCGGAC 587
BSNT_02562___ 589 GTAGCGACGCCTGCCA-TTGCAAGAGAGAAAGGTTCATCAGCGATTGTAG 637
| |||||.|| |.|| ||||.|.|||.||.|||||.|||||.||.||.|
RBAM_015380__ 588 G--GCGACTCC-GTCATTTGCGAAAGAAAACGGTTCGTCAGCCATCGTCG 634
BSNT_02562___ 638 TAGGACGCTCGATTACAAAAGCGGAAGACCCGGTAAAAGCCTATAAGGCT 687
|.||.|||||.|||||||||||||||.||||.||..||||.|||.|.||.
RBAM_015380__ 635 TGGGCCGCTCAATTACAAAAGCGGAAAACCCCGTTGAAGCATATGAAGCA 684
BSNT_02562___ 688 GTCAGACTTGAATGGGAGGGAATCAAATC----TTGA 720
.|.|.|||.|||||||||||..| || .|||
RBAM_015380__ 685 ATTAAACTGGAATGGGAGGGCGT----TCGCCGATGA 717
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.