Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02561 and RBAM_015370
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:22
# Commandline: needle
# -asequence pep-align/BSNT_02561___pyrD.1.9828.seq
# -bsequence pep-align/RBAM_015370___pyrD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02561___pyrD-RBAM_015370___pyrD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02561___pyrD-RBAM_015370___pyrD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02561___pyrD
# 2: RBAM_015370___pyrD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 311
# Identity: 279/311 (89.7%)
# Similarity: 293/311 (94.2%)
# Gaps: 0/311 ( 0.0%)
# Score: 1446.0
#
#
#=======================================
BSNT_02561___ 1 MLEVKLPGLDLKNPIIPASGCFGFGKEFSRFYDLSCLGAIMIKATTKEPR 50
||||.||||.|||||||||||||||||::.||||||||.|||||||.|.|
RBAM_015370__ 1 MLEVNLPGLQLKNPIIPASGCFGFGKEYAGFYDLSCLGGIMIKATTNEAR 50
BSNT_02561___ 51 FGNPTPRVAETGAGMLNAIGLQNPGLDSVLHNELPWLEQFDTPIIANVAG 100
|||||||||||.||||||||||||||:.||::||||||||||||||||||
RBAM_015370__ 51 FGNPTPRVAETSAGMLNAIGLQNPGLEHVLNHELPWLEQFDTPIIANVAG 100
BSNT_02561___ 101 SQVEDYVEVAEHISKAPNVHALELNISCPNVKTGGIAFGTNPEMAADLTK 150
|||:||.|||||||:|||||||||||||||||||||||||:|.|||:|||
RBAM_015370__ 101 SQVDDYKEVAEHISQAPNVHALELNISCPNVKTGGIAFGTDPVMAAELTK 150
BSNT_02561___ 151 AVKEVSNVPVYVKLSPNVANITEIALAIEEAGADGLTMINTLIGMRLDLK 200
||||||.||||||||||||||||||.|||.||||||||||||||||||||
RBAM_015370__ 151 AVKEVSAVPVYVKLSPNVANITEIAKAIEAAGADGLTMINTLIGMRLDLK 200
BSNT_02561___ 201 TGKPILANKTGGLSGPAVKPVAIRMVYEVSQVVNIPIIGMGGVQTAEDAL 250
||:||||||||||||||:|||||||||||||.|:||||||||||||||||
RBAM_015370__ 201 TGRPILANKTGGLSGPAIKPVAIRMVYEVSQAVHIPIIGMGGVQTAEDAL 250
BSNT_02561___ 251 EFLLAGASAVAVGTANFVNPFACPEIIEQLPSVLRQYGYQSIEECIGRSW 300
|||||||||||||||||||||.|||||||||.||||||:||:.|||||||
RBAM_015370__ 251 EFLLAGASAVAVGTANFVNPFVCPEIIEQLPRVLRQYGFQSVSECIGRSW 300
BSNT_02561___ 301 NHEKQPAHHRA 311
.||||||||||
RBAM_015370__ 301 KHEKQPAHHRA 311
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