Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02561 and RBAM_015370
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:23
# Commandline: needle
# -asequence dna-align/BSNT_02561___pyrD.1.9828.seq
# -bsequence dna-align/RBAM_015370___pyrD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02561___pyrD-RBAM_015370___pyrD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02561___pyrD-RBAM_015370___pyrD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02561___pyrD
# 2: RBAM_015370___pyrD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 948
# Identity: 740/948 (78.1%)
# Similarity: 740/948 (78.1%)
# Gaps: 24/948 ( 2.5%)
# Score: 2847.5
#
#
#=======================================
BSNT_02561___ 1 ATGCTAGAGGTGAAATTGCCGGGACTTGATTTGAAAAACCCAATCATTCC 50
|||.||||||||||..|||||||.||..|.|||||||||||.|||||.||
RBAM_015370__ 1 ATGTTAGAGGTGAATCTGCCGGGTCTCCAATTGAAAAACCCGATCATCCC 50
BSNT_02561___ 51 TGCATCAGGCTGCTTCGGTTTTGGAAAAGAATTTTCACGTTTTTATGATT 100
.||.||.||.||.||||||||.||.|||||||.|.|..|.|||||.||||
RBAM_015370__ 51 CGCTTCCGGATGTTTCGGTTTCGGGAAAGAATATGCCGGATTTTACGATT 100
BSNT_02561___ 101 TGTCTTGTCTTGGAGCCATCATGATTAAGGCTACGAC-AAAGGAGCCACG 149
|.||.||.||.||||.|||.||||||||.||.||||| ||.|.|||| ||
RBAM_015370__ 101 TATCATGCCTCGGAGGCATTATGATTAAAGCCACGACGAACGAAGCC-CG 149
BSNT_02561___ 150 CTTTGGGAATCCGACGCCGCGGGTAGCTGAGACTGGTGCTGGAATGCTCA 199
|||.||.||||||||||||.|.||.||.|||||..|.||.||||||||.|
RBAM_015370__ 150 CTTCGGAAATCCGACGCCGAGAGTGGCGGAGACAAGCGCGGGAATGCTGA 199
BSNT_02561___ 200 ATGCGATCGGTCTCCAAAATCCGGGGCTGGATAGCGTGTTGC---ATAAT 246
||||.|||||.||.||||||||.||.||.| |||.|| ||| ||.||
RBAM_015370__ 200 ATGCCATCGGACTGCAAAATCCCGGCCTTG--AGCATG-TGCTCAATCAT 246
BSNT_02561___ 247 GAGCTGCCGTGGCTTGAGCAGTTTGATACGCCGATCATTGCCAATGTCGC 296
||||||||.|||||.||.||.|||||.||||||||.||.||.||||||||
RBAM_015370__ 247 GAGCTGCCTTGGCTCGAACAATTTGACACGCCGATTATCGCAAATGTCGC 296
BSNT_02561___ 297 AGGTTCTCAAGTCGAGGATTATGTTGAAGTCGCAGAGCATATCAGCAAAG 346
.||||||||.||.||.||.|||...|||||.||.|||||.||||||.|||
RBAM_015370__ 297 GGGTTCTCAGGTGGACGACTATAAAGAAGTGGCCGAGCACATCAGCCAAG 346
BSNT_02561___ 347 CGCCTAATGTTCATGCTCTTGAATTGAATATTTCCTGCCCGAATGTGAAA 396
||||.|||||.|||||.|||||..|.||.|||||.||.||||||||.|||
RBAM_015370__ 347 CGCCGAATGTGCATGCGCTTGAGCTTAACATTTCATGTCCGAATGTCAAA 396
BSNT_02561___ 397 ACAGGCGGAATCGCTTTTGGCACGAATCCTGAAATGGCTGCCGATTTGAC 446
||.||.||.||.||||||||.||..||||.|..|||||.|||||..||||
RBAM_015370__ 397 ACGGGGGGGATTGCTTTTGGTACTGATCCCGTCATGGCGGCCGAACTGAC 446
BSNT_02561___ 447 AAAAGCGGTGAAAGAGGTTT-CGAATGTACCCGTTTATGTGAAGCTTTCT 495
|||||||||||||||.|||| ||.| ||.||.||.||||||||||||||.
RBAM_015370__ 447 AAAAGCGGTGAAAGAAGTTTCCGCA-GTGCCTGTGTATGTGAAGCTTTCG 495
BSNT_02561___ 496 CCGAACGTGGCCAATATCACAGAAATTGCATTAGCGATCGAGGAAGCGGG 545
||.||.||.||.||.||.||.||.|||||...||||||.||.|..||.||
RBAM_015370__ 496 CCTAATGTCGCAAACATAACCGAGATTGCCAAAGCGATTGAAGCGGCCGG 545
BSNT_02561___ 546 AGCGGACGGTCTTACGATGATCAACACACTAATCGGCATGAGACTCGATT 595
.||.||||||||.||||||||.||.|||||.|||||.|||||.||||||.
RBAM_015370__ 546 TGCTGACGGTCTGACGATGATTAATACACTCATCGGGATGAGGCTCGATC 595
BSNT_02561___ 596 TAAAAAC----CGGCAAACCGATATTAGCGAATAAAACAGGGGGACTTTC 641
|.||.|| ||| |||||.|||||.||||||||.||.|||||.||
RBAM_015370__ 596 TCAAGACGGGACGG----CCGATCTTAGCAAATAAAACGGGCGGACTGTC 641
BSNT_02561___ 642 AGGCCCTGCTGTGAAGCCGGTTGCCATTCGCATGGTGTATGAAGTCAGCC 691
||||||.||..|.||.|||||.|||||.||.|||||.||.||||||||||
RBAM_015370__ 642 AGGCCCGGCGATCAAACCGGTCGCCATCCGGATGGTATACGAAGTCAGCC 691
BSNT_02561___ 692 AGGTGGTCAACATCCCGATTATCGGAATGGGAGGCGTGCAGACGGCTGAA 741
|||..||..|.||||||||||||||.|||||.|||||.|||||.||.||.
RBAM_015370__ 692 AGGCCGTTCATATCCCGATTATCGGGATGGGCGGCGTTCAGACCGCAGAG 741
BSNT_02561___ 742 GATGCCCTGGAATTTCTTCTCGCGGGAGCAAGCGCAGTCGCTGTCGGAAC 791
|||||..|.|||||||||||.||||||||.||.||.||.||.|||||.||
RBAM_015370__ 742 GATGCATTAGAATTTCTTCTTGCGGGAGCGAGTGCGGTTGCCGTCGGCAC 791
BSNT_02561___ 792 AGCAAACTTTGTGAATCCTTTTGCATGTCCAGAGATTATTGAACAGCTCC 841
.||||||||.||.|||||.||.|..||.||.||.||.||.||||||||||
RBAM_015370__ 792 GGCAAACTTCGTCAATCCGTTCGTCTGCCCGGAAATCATAGAACAGCTCC 841
BSNT_02561___ 842 CATCTGTTTTGCGCCAATACGGCTATCAATCAATTGAA---GAATGCATC 888
|...|||..||||.||||||||||.|||||| ||.| |||||||||
RBAM_015370__ 842 CCCGTGTGCTGCGTCAATACGGCTTTCAATC---TGTAAGTGAATGCATC 888
BSNT_02561___ 889 GGAAGGAGCTGGAATCATGAAAAACAACCTGCCCATCATCGCGCTTGA 936
||||||||||||||.|||||||||||||||||||||||||||||||||
RBAM_015370__ 889 GGAAGGAGCTGGAAACATGAAAAACAACCTGCCCATCATCGCGCTTGA 936
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