Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02558 and RBAM_015340
See
DNA alignment /
Visit
BSNT_02558 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:22
# Commandline: needle
# -asequence pep-align/BSNT_02558___pyrAA.1.9828.seq
# -bsequence pep-align/RBAM_015340___pyrAA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02558___pyrAA-RBAM_015340___pyrAA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02558___pyrAA-RBAM_015340___pyrAA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02558___pyrAA
# 2: RBAM_015340___pyrAA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 364
# Identity: 343/364 (94.2%)
# Similarity: 354/364 (97.3%)
# Gaps: 0/364 ( 0.0%)
# Score: 1804.0
#
#
#=======================================
BSNT_02558___ 1 MKRRLVLENGAVFEGEAFGSLEHNMGEVVFNTGMTGYQEILSDPSYCGQI 50
|||||||||||||||||||||||..|||||||||||||||||||||||||
RBAM_015340__ 1 MKRRLVLENGAVFEGEAFGSLEHTAGEVVFNTGMTGYQEILSDPSYCGQI 50
BSNT_02558___ 51 VTLTYPLIGNYGINRDDFESITPFVKGLIIKELCELPSNWRSAYTLDEYL 100
|||||||||||||||||||||||||||||:||||||||||||||||||||
RBAM_015340__ 51 VTLTYPLIGNYGINRDDFESITPFVKGLIVKELCELPSNWRSAYTLDEYL 100
BSNT_02558___ 101 KMKNIPGLQGIDTRKLTRMIRTAGALKGTFASSDEDIEAVLKRLNETELP 150
|||||||||||||||||||||||||||||||||:|::..||.||.|||||
RBAM_015340__ 101 KMKNIPGLQGIDTRKLTRMIRTAGALKGTFASSEENVGEVLARLKETELP 150
BSNT_02558___ 151 RNQVSQVSAKTAYPSPGRGKRIVLVDFGMKHGILRELNKRKCDVIVVPYN 200
||||:|||||||||||||||||||||||||||||||||||||||||||||
RBAM_015340__ 151 RNQVAQVSAKTAYPSPGRGKRIVLVDFGMKHGILRELNKRKCDVIVVPYN 200
BSNT_02558___ 201 ITAEEVLQLKPDGIMLSNGPGDPKDVPEAIEMIKGVLGKVPLFGICLGHQ 250
:||||||||||||||||||||||||||||||||||:||||||||||||||
RBAM_015340__ 201 VTAEEVLQLKPDGIMLSNGPGDPKDVPEAIEMIKGILGKVPLFGICLGHQ 250
BSNT_02558___ 251 LFALACGANTEKMKFGHRGSNHPVKELATGKVALTSQNHGYTVSSISKTE 300
|||||.||.||||||||||||||||||||||||||:||||||||||.:||
RBAM_015340__ 251 LFALASGAETEKMKFGHRGSNHPVKELATGKVALTAQNHGYTVSSIDETE 300
BSNT_02558___ 301 LEVTHIAINDDTIEGLKHKTLPAFTVQYHPEASPGPEDANHLFDRFIEMI 350
||||||||||.||||||||||||||||||||||||||||||||||||::|
RBAM_015340__ 301 LEVTHIAINDQTIEGLKHKTLPAFTVQYHPEASPGPEDANHLFDRFIDLI 350
BSNT_02558___ 351 ETTEKEGEAVCQNA 364
||||||||||||||
RBAM_015340__ 351 ETTEKEGEAVCQNA 364
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.