Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02558 and RBAM_015340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:22
# Commandline: needle
# -asequence dna-align/BSNT_02558___pyrAA.1.9828.seq
# -bsequence dna-align/RBAM_015340___pyrAA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02558___pyrAA-RBAM_015340___pyrAA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02558___pyrAA-RBAM_015340___pyrAA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02558___pyrAA
# 2: RBAM_015340___pyrAA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1097
# Identity: 905/1097 (82.5%)
# Similarity: 905/1097 (82.5%)
# Gaps: 4/1097 ( 0.4%)
# Score: 3733.0
#
#
#=======================================
BSNT_02558___ 1 ATGAAGAGACGATTAGTACTGGAAAACGGAGCGGTATTCGAGGGAGAAGC 50
|||||.|||.||.||||.||||||||.|||||||||||.|||||.|||||
RBAM_015340__ 1 ATGAAAAGAAGACTAGTGCTGGAAAATGGAGCGGTATTTGAGGGTGAAGC 50
BSNT_02558___ 51 CTTCGGAAGCTTAGAACACAACATGGGAGAAGTCGTTTTTAATACTGGGA 100
.|||||.|||.|.||.||.|.|..|||.||||||||.||.||.||.||.|
RBAM_015340__ 51 ATTCGGGAGCCTGGAGCATACCGCGGGTGAAGTCGTATTCAACACGGGAA 100
BSNT_02558___ 101 TGACAGGCTATCAGGAAATTTTATCTGATCCTTCTTACTGCGGACAAATC 150
||||.||.|||||||||||||||||.||.||||||||||||||.||.|||
RBAM_015340__ 101 TGACCGGTTATCAGGAAATTTTATCAGACCCTTCTTACTGCGGGCAGATC 150
BSNT_02558___ 151 GTAACATTAACATACCCGCTTATCGGAAATTACGGCATTAACCGTGATGA 200
||.||..|.||.||.||.||.|||||.||.|||||.||||||.|.|||||
RBAM_015340__ 151 GTGACGCTGACGTATCCACTGATCGGCAACTACGGAATTAACAGAGATGA 200
BSNT_02558___ 201 TTTTGAATCCATTACCCCTTTTGTCAAAGGGCTGATCATCAAAGAATTAT 250
.|||||||||||.||.||||||||.||||||||||||.|.||||||.|.|
RBAM_015340__ 201 CTTTGAATCCATCACTCCTTTTGTAAAAGGGCTGATCGTAAAAGAACTGT 250
BSNT_02558___ 251 GTGAGCTGCCTTCCAACTGGCGTTCAGCATACAC-CTTAGACGAGTATTT 299
|.|||||||||||||||||||||||.||.||||| ||| |||||||||||
RBAM_015340__ 251 GCGAGCTGCCTTCCAACTGGCGTTCGGCTTACACGCTT-GACGAGTATTT 299
BSNT_02558___ 300 AAAAATGAAAAACATTCCCGGACTCCAGGGGATTGATACAAGGAAGCTGA 349
.|||||||||||.||.|||||..|.||.||||||||.||.||.|||||.|
RBAM_015340__ 300 GAAAATGAAAAATATCCCCGGCTTACAAGGGATTGACACGAGAAAGCTCA 349
BSNT_02558___ 350 CAAGAATGATCCGCACGGCAGGCGCGCTAAAAGGAACATTCGCTTCATCT 399
|||||||||||||||||||.|||||..||||||||||.||.||||||..|
RBAM_015340__ 350 CAAGAATGATCCGCACGGCCGGCGCATTAAAAGGAACGTTTGCTTCAAGT 399
BSNT_02558___ 400 GATGAAGATATCGAAGCAGTGCTGAAAAGACTGAACGAAACGGAATTGCC 449
||.||..||.|||.||..||.||...|||.|||||.|||||||||.||||
RBAM_015340__ 400 GAGGAGAATGTCGGAGAGGTTCTTGCAAGGCTGAAAGAAACGGAACTGCC 449
BSNT_02558___ 450 AAGAAATCAAGTATCCCAAGTATCAGCAAAAACAGCATATCCGAGCCCGG 499
.|||||||||||..|.||||||||.||.|||||.|||||||||||.||||
RBAM_015340__ 450 GAGAAATCAAGTCGCTCAAGTATCTGCGAAAACGGCATATCCGAGTCCGG 499
BSNT_02558___ 500 GAAGAGGCAAACGCATCGTCTTGGTTGACTTCGGCATGAAACACGGGATT 549
|..|.||||||||||||||..|.||.||.|||||.|||||.|||||.|||
RBAM_015340__ 500 GCCGCGGCAAACGCATCGTACTCGTCGATTTCGGTATGAAGCACGGCATT 549
BSNT_02558___ 550 CTAAGAGAGCTGAACAAACGGAAATGTGACGTCATCGTTGTGCCTTACAA 599
.||||||||.|.||||||.|.|||||.||.||||||||||||||.|||||
RBAM_015340__ 550 TTAAGAGAGTTAAACAAAAGAAAATGCGATGTCATCGTTGTGCCGTACAA 599
BSNT_02558___ 600 CATTACAGCGGAAGAGGTGCTTCAGCTGAAACCGGACGGTATCATGCTTT 649
..|.||.||||||||.|||||||||||.||.||||||||.||||||||||
RBAM_015340__ 600 TGTAACGGCGGAAGAAGTGCTTCAGCTCAAGCCGGACGGCATCATGCTTT 649
BSNT_02558___ 650 CTAACGGACCTGGAGACCCGAAGGATGTGCCTGAAGCGATTGAAATGATT 699
||||||||||.|||||.|||||.||||||||.|||||.|||||||||||.
RBAM_015340__ 650 CTAACGGACCCGGAGATCCGAAAGATGTGCCGGAAGCCATTGAAATGATA 699
BSNT_02558___ 700 AAAGGTGTTCTTGGAAAAGTGCCATTATTCGGAATATGTCTCGGCCACCA 749
|||||..|.||.||.||.|||||.|||||||||||.||.|||||||||||
RBAM_015340__ 700 AAAGGCATACTCGGGAAGGTGCCGTTATTCGGAATCTGCCTCGGCCACCA 749
BSNT_02558___ 750 ATTATTCGCGCTGGCGTGCGGGGCGAATACTGAAAAAATGAAATTCGGCC 799
||||||.||||||||.|.|||.|||.|.||.|||||||||||||||||.|
RBAM_015340__ 750 ATTATTTGCGCTGGCATCCGGAGCGGAAACGGAAAAAATGAAATTCGGAC 799
BSNT_02558___ 800 ACAGGGGCTCAAACCACCCGGTAAAAGAGCTGGCTACAGGAAAAGTTGCC 849
|||||||.||.||.||.|||||.||||||||.||.|||||.|||||.||.
RBAM_015340__ 800 ACAGGGGTTCTAATCATCCGGTTAAAGAGCTTGCGACAGGGAAAGTCGCT 849
BSNT_02558___ 850 TTAACATCTCAAAACCATGGATATACAGTTTCGTCTATCAG-TAAAACAG 898
|||||..||||||||||.||||||||||||||.||.|| || |.|.||||
RBAM_015340__ 850 TTAACCGCTCAAAACCACGGATATACAGTTTCTTCAAT-AGATGAGACAG 898
BSNT_02558___ 899 AACTGGAAGTGACGCATATCGCAATTAACGACGATACGATTGAAGGGCTG 948
|.||.|||||||||||.||.||.||.||.||..|.|||||.|||||.||.
RBAM_015340__ 899 AGCTTGAAGTGACGCACATTGCGATCAATGATCAAACGATCGAAGGACTC 948
BSNT_02558___ 949 AAGCATAAAACATTGCCGGCATTTACGGTTCAATATCATCCCGAAGCCTC 998
||||||||||||||||||||||||||||||||.||.||.||.|||||.||
RBAM_015340__ 949 AAGCATAAAACATTGCCGGCATTTACGGTTCAGTACCACCCTGAAGCTTC 998
BSNT_02558___ 999 ACCTGGTCCTGAGGATGCCAACCATCTATTTGACAGATTCATCGAAATGA 1048
|||.||.||.||.||.|||||.|||.||||||||||||||||.||..|||
RBAM_015340__ 999 ACCGGGACCGGAAGACGCCAATCATTTATTTGACAGATTCATTGACTTGA 1048
BSNT_02558___ 1049 TCGAAACAACAGAGAAAGAAGGGGAAGCGGTATGCCAAAACGCGTAG 1095
||||||||||.||||||||||||||||||||||||||||||||||||
RBAM_015340__ 1049 TCGAAACAACTGAGAAAGAAGGGGAAGCGGTATGCCAAAACGCGTAG 1095
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