Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02555 and RBAM_015320
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:21
# Commandline: needle
# -asequence pep-align/BSNT_02555___pyrB.1.9828.seq
# -bsequence pep-align/RBAM_015320___pyrB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02555___pyrB-RBAM_015320___pyrB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02555___pyrB-RBAM_015320___pyrB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02555___pyrB
# 2: RBAM_015320___pyrB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 304
# Identity: 240/304 (78.9%)
# Similarity: 268/304 (88.2%)
# Gaps: 0/304 ( 0.0%)
# Score: 1246.0
#
#
#=======================================
BSNT_02555___ 1 MKHLTTMSELSTEEIKDLLQKAQDLKSGKTDNQLTGKFAANLFFEPSTRT 50
|.|||.|||||..||.:||::|:.:|.|...:.|.|||.|||||||||||
RBAM_015320__ 1 MNHLTAMSELSAAEITELLREAKAIKEGTVRHDLAGKFVANLFFEPSTRT 50
BSNT_02555___ 51 RFSFEVAEKKLGMNVLNLDGTSTSVQKGETLYDTIRTLESIGVDVCVIRH 100
||||||||||||||||:||.|||||||||:||||::||||||.|.|||||
RBAM_015320__ 51 RFSFEVAEKKLGMNVLSLDDTSTSVQKGESLYDTVKTLESIGADACVIRH 100
BSNT_02555___ 101 SEDEYYEELVSQVNIPILNAGDGCGQHPTQSLLDLMTIYEEFNTFKGLTV 150
|.||||::|..:||||||||||||||||||||||||||.|||.||:||||
RBAM_015320__ 101 STDEYYKDLTGRVNIPILNAGDGCGQHPTQSLLDLMTIQEEFETFQGLTV 150
BSNT_02555___ 151 SIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQDEENTFGTYVSMDEA 200
|||||||||||||||||||||||||||||||.:||||:|.|||.|..|||
RBAM_015320__ 151 SIHGDIKHSRVARSNAEVLTRLGARVLFSGPPQWQDEKNAFGTCVQTDEA 200
BSNT_02555___ 201 VESSDVVMLLRIQNERHQSAVSQEGYLNKYGLTVERAERMKRHAIIMHPA 250
:::|||||||||||||||:...|:|||..||||.:|||.|||||||||||
RBAM_015320__ 201 IQASDVVMLLRIQNERHQTEADQKGYLEAYGLTAKRAESMKRHAIIMHPA 250
BSNT_02555___ 251 PVNRGVEIDDSLVESEKSRIFKQMQNGVFIRMAVIQRALQTNVKRGEAAY 300
|||||||||.:|||..||||||||:|||:|||||::||||||||||||||
RBAM_015320__ 251 PVNRGVEIDTTLVECGKSRIFKQMENGVYIRMAVLKRALQTNVKRGEAAY 300
BSNT_02555___ 301 VISH 304
|:||
RBAM_015320__ 301 VLSH 304
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