Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02555 and RBAM_015320

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########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:21
# Commandline: needle
#    -asequence pep-align/BSNT_02555___pyrB.1.9828.seq
#    -bsequence pep-align/RBAM_015320___pyrB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02555___pyrB-RBAM_015320___pyrB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02555___pyrB-RBAM_015320___pyrB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02555___pyrB
# 2: RBAM_015320___pyrB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 304
# Identity:     240/304 (78.9%)
# Similarity:   268/304 (88.2%)
# Gaps:           0/304 ( 0.0%)
# Score: 1246.0
# 
#
#=======================================

BSNT_02555___      1 MKHLTTMSELSTEEIKDLLQKAQDLKSGKTDNQLTGKFAANLFFEPSTRT     50
                     |.|||.|||||..||.:||::|:.:|.|...:.|.|||.|||||||||||
RBAM_015320__      1 MNHLTAMSELSAAEITELLREAKAIKEGTVRHDLAGKFVANLFFEPSTRT     50

BSNT_02555___     51 RFSFEVAEKKLGMNVLNLDGTSTSVQKGETLYDTIRTLESIGVDVCVIRH    100
                     ||||||||||||||||:||.|||||||||:||||::||||||.|.|||||
RBAM_015320__     51 RFSFEVAEKKLGMNVLSLDDTSTSVQKGESLYDTVKTLESIGADACVIRH    100

BSNT_02555___    101 SEDEYYEELVSQVNIPILNAGDGCGQHPTQSLLDLMTIYEEFNTFKGLTV    150
                     |.||||::|..:||||||||||||||||||||||||||.|||.||:||||
RBAM_015320__    101 STDEYYKDLTGRVNIPILNAGDGCGQHPTQSLLDLMTIQEEFETFQGLTV    150

BSNT_02555___    151 SIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQDEENTFGTYVSMDEA    200
                     |||||||||||||||||||||||||||||||.:||||:|.|||.|..|||
RBAM_015320__    151 SIHGDIKHSRVARSNAEVLTRLGARVLFSGPPQWQDEKNAFGTCVQTDEA    200

BSNT_02555___    201 VESSDVVMLLRIQNERHQSAVSQEGYLNKYGLTVERAERMKRHAIIMHPA    250
                     :::|||||||||||||||:...|:|||..||||.:|||.|||||||||||
RBAM_015320__    201 IQASDVVMLLRIQNERHQTEADQKGYLEAYGLTAKRAESMKRHAIIMHPA    250

BSNT_02555___    251 PVNRGVEIDDSLVESEKSRIFKQMQNGVFIRMAVIQRALQTNVKRGEAAY    300
                     |||||||||.:|||..||||||||:|||:|||||::||||||||||||||
RBAM_015320__    251 PVNRGVEIDTTLVECGKSRIFKQMENGVYIRMAVLKRALQTNVKRGEAAY    300

BSNT_02555___    301 VISH    304
                     |:||
RBAM_015320__    301 VLSH    304


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