Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02555 and RBAM_015320
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:21
# Commandline: needle
# -asequence dna-align/BSNT_02555___pyrB.1.9828.seq
# -bsequence dna-align/RBAM_015320___pyrB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02555___pyrB-RBAM_015320___pyrB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02555___pyrB-RBAM_015320___pyrB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02555___pyrB
# 2: RBAM_015320___pyrB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 936
# Identity: 710/936 (75.9%)
# Similarity: 710/936 (75.9%)
# Gaps: 42/936 ( 4.5%)
# Score: 2650.5
#
#
#=======================================
BSNT_02555___ 1 ATGAAGCATTTAACGACGATGAGTGAACTCAGCACTGAGGAAATCAAAGA 50
|||||.|||||||||.|||||..||||||.|||.|.|..|||||.|.|||
RBAM_015320__ 1 ATGAATCATTTAACGGCGATGTCTGAACTGAGCGCGGCTGAAATTACAGA 50
BSNT_02555___ 51 TTTGCTTC------AAAAAGCACAAGATCTCAAAAGCGGAAAAACAG--- 91
..||||.| .||||||| || |||||.|| .|||||
RBAM_015320__ 51 ACTGCTGCGTGAGGCAAAAGCA----AT---AAAAGAGG--GAACAGTCC 91
BSNT_02555___ 92 ACAATCAGCTTACAGGAAAGTTTGCCGCAAACCTGTTTTTCGAACCGAGC 141
.|.||.|.||..|.|||||.||||..||.||.||||||||.|||||||||
RBAM_015320__ 92 GCCATGATCTCGCGGGAAAATTTGTTGCGAATCTGTTTTTTGAACCGAGC 141
BSNT_02555___ 142 ACGAGAACGCGGTTCAGCTTTGAGGTCGCAGAAAAAAAGCTGGGCATGAA 191
|||||||||||||||||||||||.||.||.|||||.||.||.||.|||||
RBAM_015320__ 142 ACGAGAACGCGGTTCAGCTTTGAAGTGGCGGAAAAGAAACTCGGAATGAA 191
BSNT_02555___ 192 TGTGCTCAACCTTGATGGAACAAGCACAAGCGTGCAAAAAGGCGAAACCT 241
.|||||||.|.|.||.|..||.|||||||||||.|||||||||||..|||
RBAM_015320__ 192 CGTGCTCAGCTTAGACGATACGAGCACAAGCGTTCAAAAAGGCGAGTCCT 241
BSNT_02555___ 242 TATATGACACGATCCGGACGCTCGAATCAATCGGTGTGGACGTCTGCGTC 291
|||||||||||.||...||.||.|||||||||||.|.|||||.|||||||
RBAM_015320__ 242 TATATGACACGGTCAAAACACTGGAATCAATCGGAGCGGACGCCTGCGTC 291
BSNT_02555___ 292 ATCAGGCACAGTGAGGATGAGTATTATGAAGAGCTTGTCAGCCAG-GTGA 340
|||||||||||...||||||.|||||..||||.| ||.|.|.||| ||.|
RBAM_015320__ 292 ATCAGGCACAGCACGGATGAATATTACAAAGATC-TGACCGGCAGAGTCA 340
BSNT_02555___ 341 ATATTCCGATTCTGAATGCGGGAGACGGATGCGGCCAGCATCCAACACAA 390
||||||||||..|.||.||.||.|||||.|||||||||||.||.||.||.
RBAM_015320__ 341 ATATTCCGATCTTAAACGCCGGCGACGGCTGCGGCCAGCACCCGACTCAG 390
BSNT_02555___ 391 TCACTGCTTGATTTAATGACGATTTATGAAGAGTTCAATACGTTCAAAGG 440
|||.|.||.|||||||||||||||.|.||.||.||..|.||.||..|.||
RBAM_015320__ 391 TCATTACTCGATTTAATGACGATTCAAGAGGAATTTGAGACCTTTCAGGG 440
BSNT_02555___ 441 GCTTACTGTCTCCATTCACGGCGACATCAAGCATAGCAGAGTGGCAAGGT 490
.||.||.||.||||||||.|||||.|||||.||.|||||.||||||||||
RBAM_015320__ 441 CCTGACGGTTTCCATTCATGGCGATATCAAACACAGCAGGGTGGCAAGGT 490
BSNT_02555___ 491 CAAATGCGGAAGTGTTGACAAGATTGGGTGCCCGGGTCCTATTTTCCGGC 540
|.|||||.||.|||.|||||||..|.||.||.||.||.||.|||||.||.
RBAM_015320__ 491 CGAATGCCGAGGTGCTGACAAGGCTCGGCGCACGTGTGCTGTTTTCTGGT 540
BSNT_02555___ 541 CCTTCGGAATGGCAGGATGAAGAAAATACATTCGGTACGTATGTCTCA-A 589
||..||.|||||||||||||..||||..|.|||||.||.|.||| ||| |
RBAM_015320__ 541 CCGCCGCAATGGCAGGATGAGAAAAACGCCTTCGGCACCTGTGT-TCAGA 589
BSNT_02555___ 590 TGGATGAAGCAGTTGAGTCTTCCGATGTCGTCATGCTGCTGCGCATTCAA 639
.|||||||||..|..|..||||.|||||.|||||||||||.|||||.|||
RBAM_015320__ 590 CGGATGAAGCCATACAAGCTTCAGATGTGGTCATGCTGCTCCGCATCCAA 639
BSNT_02555___ 640 AATGAACGACATCAATCCGCTGTCAG-------CCAGGAAGGCTA--TTT 680
||||||.|.||||| |.||| |||..||||||| |..
RBAM_015320__ 640 AATGAAAGGCATCA-------GACAGAAGCCGACCAAAAAGGCTACCTGG 682
BSNT_02555___ 681 AAACAAATACGGCTTGACCGTAGAACGGGCTGAGCGTATGAAGCGGCATG 730
||.| ||||||..||||||.|.|.|||||.|||.|.|||||||||||||
RBAM_015320__ 683 AAGC--ATACGGGCTGACCGCAAAGCGGGCGGAGAGCATGAAGCGGCATG 730
BSNT_02555___ 731 CGATCATCATGCATCCTGCTCCGGTAAACAGAGGGGTGGAGATTGATGAC 780
|.||||||||||||||.||.|||||.||||||||.||.||.||||| .||
RBAM_015320__ 731 CCATCATCATGCATCCCGCACCGGTGAACAGAGGAGTCGAAATTGA-CAC 779
BSNT_02555___ 781 AGC-TTAGTAGAAAGCGAAAAATCAAGAATCTTCAAGCAAATGCAAAATG 829
|.| |||||.|||.|||.|||||||||||||||.||.||||||.||||||
RBAM_015320__ 780 AACATTAGTGGAATGCGGAAAATCAAGAATCTTTAAACAAATGGAAAATG 829
BSNT_02555___ 830 GCGTATTTATCAGAATGGCAGTGATACAGCGTGCCTTACAAACCAATGTG 879
||||.|.|||||||||||||||..||.|..|.||..|.||||||||||||
RBAM_015320__ 830 GCGTGTATATCAGAATGGCAGTCTTAAAAAGAGCACTGCAAACCAATGTG 879
BSNT_02555___ 880 AAAAGAGGAGAAGCAGCGTATGTCATATCTCATTAA 915
|||||.||||||||.||.||||||.|||||||||||
RBAM_015320__ 880 AAAAGGGGAGAAGCGGCTTATGTCTTATCTCATTAA 915
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