Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02549 and RBAM_015270

See DNA alignment / Visit BSNT_02549 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:21
# Commandline: needle
#    -asequence pep-align/BSNT_02549.1.9828.seq
#    -bsequence pep-align/RBAM_015270___ylyA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02549-RBAM_015270___ylyA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02549-RBAM_015270___ylyA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02549
# 2: RBAM_015270___ylyA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 124
# Identity:      92/124 (74.2%)
# Similarity:   104/124 (83.9%)
# Gaps:           1/124 ( 0.8%)
# Score: 469.0
# 
#
#=======================================

BSNT_02549         1 MNDQLTAIYTELLLMKEELQSRLFEYSCFQVSTSPQAAINHKQKATLIYH     50
                     ||||||||:||||:|||||||||||||||.:|.|.:.::| .|:||||||
RBAM_015270__      1 MNDQLTAIHTELLMMKEELQSRLFEYSCFHMSASVEPSMN-DQEATLIYH     49

BSNT_02549        51 IKEELQDVLLALSKIENGTFGYCEETGAPIPLAKLAVLPTARTANDFLYS    100
                     ||||||||||||||.||..:||||:||.|||:.|||||||||||:||.|.
RBAM_015270__     50 IKEELQDVLLALSKFENNMYGYCEKTGDPIPIEKLAVLPTARTADDFYYP     99

BSNT_02549       101 VQFEKKTLPIWKSTDIEYGQALYE    124
                     .||||||||.|:..|..|.|||||
RBAM_015270__    100 AQFEKKTLPYWEPGDYAYDQALYE    123


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