Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02549 and RBAM_015270
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:21
# Commandline: needle
# -asequence dna-align/BSNT_02549.1.9828.seq
# -bsequence dna-align/RBAM_015270___ylyA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02549-RBAM_015270___ylyA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02549-RBAM_015270___ylyA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02549
# 2: RBAM_015270___ylyA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 389
# Identity: 290/389 (74.6%)
# Similarity: 290/389 (74.6%)
# Gaps: 31/389 ( 8.0%)
# Score: 1067.5
#
#
#=======================================
BSNT_02549 1 ATGAATGATCAACTGACCGCAATTTATACGGAACTTCTTCTGATGAAAGA 50
|||||||||||||||||||||||..|.|||||.|||||..||||||||||
RBAM_015270__ 1 ATGAATGATCAACTGACCGCAATCCACACGGAGCTTCTCATGATGAAAGA 50
BSNT_02549 51 AGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGTTTCTACAA 100
||||.|.||.||.||||||||.||.||||||||||||||..|.||
RBAM_015270__ 51 AGAACTTCAATCAAGATTATTCGAATATTCTTGCTTTCACATGTC----- 95
BSNT_02549 101 GCCCGCAAGCAGC-----AA---TCAATCATA--AACAAAAAGCAACTCT 140
||||.| || |||||.| | |.|||.||||||||||
RBAM_015270__ 96 -------AGCATCTGTTGAACCTTCAATGA-ACGACCAAGAAGCAACTCT 137
BSNT_02549 141 GATCTATCATATTAAAGAAGAGCTTCAAGACGTTCTCCTTGCATTGTCCA 190
||||||||||||.||||||||.|||||.||||||||.|||||..||||.|
RBAM_015270__ 138 GATCTATCATATAAAAGAAGAACTTCAGGACGTTCTTCTTGCCCTGTCTA 187
BSNT_02549 191 AAATCGAAAACGGCACATTCGGATACTGTGAAGAAACCGGGGCTCCCATT 240
|..|.||||||...|..|.|||.||.||||||.||||.||.|..||||||
RBAM_015270__ 188 AGTTTGAAAACAATATGTACGGTTATTGTGAAAAAACAGGCGACCCCATT 237
BSNT_02549 241 CCTCTTGCAAAGCTGGCAGTGCTGCCGACTGCCCGAACAGCAAACGATTT 290
||..|||.|||.||.||.|||||||||||.|||.||||.||..|.|||||
RBAM_015270__ 238 CCGATTGAAAAACTTGCGGTGCTGCCGACGGCCAGAACCGCTGATGATTT 287
BSNT_02549 291 TCTTTATTCTGTCCAATTTGAAAAAAAAACGCTTCCGATA-TGGAAATCA 339
|..||||.|.|..|||||||||||.|||||.||||| ||| |||.||.|
RBAM_015270__ 288 TTATTATCCCGCTCAATTTGAAAAGAAAACCCTTCC-ATATTGGGAACC- 335
BSNT_02549 340 ACGGA---TATCGAATATGGTCAGGCACTGTATGAATAA 375
|||| ||| |.|||||.||||||.||||||||||.|
RBAM_015270__ 336 -CGGAGATTAT-GCATATGATCAGGCGCTGTATGAATGA 372
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