Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02543 and RBAM_015230

See DNA alignment / Visit BSNT_02543 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:20
# Commandline: needle
#    -asequence pep-align/BSNT_02543___ylmG.1.9828.seq
#    -bsequence pep-align/RBAM_015230___ylmG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02543___ylmG-RBAM_015230___ylmG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02543___ylmG-RBAM_015230___ylmG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02543___ylmG
# 2: RBAM_015230___ylmG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 92
# Identity:      82/92 (89.1%)
# Similarity:    87/92 (94.6%)
# Gaps:           2/92 ( 2.2%)
# Score: 423.0
# 
#
#=======================================

BSNT_02543___      1 MILYQVFSVLNLLITIYSFALIIYIFMSWVPSTRETAVGRFLASICEPYL     50
                     |||||:||||:.||.||||||||||||||||||||||||||||:||||||
RBAM_015230__      1 MILYQIFSVLSYLIYIYSFALIIYIFMSWVPSTRETAVGRFLAAICEPYL     50

BSNT_02543___     51 EPFRKIIPPIAMLDISPIVAILVLRFATTGLWGLYRMIAF--     90
                     ||||:||||||||||||||||:|||||||||||||||||.  
RBAM_015230__     51 EPFRRIIPPIAMLDISPIVAIIVLRFATTGLWGLYRMIAMYT     92


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