Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02543 and RBAM_015230

See Amino acid alignment / Visit BSNT_02543 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:20
# Commandline: needle
#    -asequence dna-align/BSNT_02543___ylmG.1.9828.seq
#    -bsequence dna-align/RBAM_015230___ylmG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02543___ylmG-RBAM_015230___ylmG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02543___ylmG-RBAM_015230___ylmG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02543___ylmG
# 2: RBAM_015230___ylmG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 282
# Identity:     217/282 (77.0%)
# Similarity:   217/282 (77.0%)
# Gaps:          12/282 ( 4.3%)
# Score: 822.5
# 
#
#=======================================

BSNT_02543___      1 ATGATCCTTTATCAAGTTTTTTCGGTTTTAAACTTATT--AATCACAATA     48
                     |||||.|||||||||.|||||||.|||.| .|.|||||  |.|.|| ||.
RBAM_015230__      1 ATGATTCTTTATCAAATTTTTTCCGTTCT-GAGTTATTTAATTTAC-ATC     48

BSNT_02543___     49 TACTCATTTGCCCTGATCATATATATTTTTATGTCATGGGTGCCGAGTAC     98
                     ||.||.||||||||||||||.|||||.|||||||||||||||||||||||
RBAM_015230__     49 TATTCGTTTGCCCTGATCATCTATATCTTTATGTCATGGGTGCCGAGTAC     98

BSNT_02543___     99 GAGGGAAACAGCAGTCGGGCGTTTTTTGGCTTCGATTTGTGAACCATATC    148
                     |||.|||||.||.|||||.||.|||.|.||..|||||||.|||||.|||.
RBAM_015230__     99 GAGAGAAACGGCGGTCGGACGGTTTCTCGCAGCGATTTGCGAACCGTATT    148

BSNT_02543___    149 TCGAACCATTCAGAAAAATCATCCCTCCGATTGCAATGCTGGATATTTCA    198
                     |.||.||.|||||||..|||||.||.||.|||||.|||||||||||.||.
RBAM_015230__    149 TAGAGCCGTTCAGAAGGATCATTCCGCCCATTGCCATGCTGGATATATCC    198

BSNT_02543___    199 CCAATCGTAGCAATACTTGTGCTTCGGTTTGCGACAACCGG-CTTGTGGG    247
                     ||.||.|||||.||..|.||||||||||||||.||.||.|| ||| ||||
RBAM_015230__    199 CCGATTGTAGCGATTATCGTGCTTCGGTTTGCCACGACGGGACTT-TGGG    247

BSNT_02543___    248 GACTTTATCGCATGATTGCGTTTTAA------    273
                     |.||.||.||||||||.||..|.||.      
RBAM_015230__    248 GCCTATACCGCATGATCGCAATGTATACTTGA    279


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