Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02540 and RBAM_015220

See DNA alignment / Visit BSNT_02540 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:20
# Commandline: needle
#    -asequence pep-align/BSNT_02540___ylmF.1.9828.seq
#    -bsequence pep-align/RBAM_015220___ylmF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02540___ylmF-RBAM_015220___ylmF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02540___ylmF-RBAM_015220___ylmF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02540___ylmF
# 2: RBAM_015220___ylmF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 153
# Identity:     137/153 (89.5%)
# Similarity:   145/153 (94.8%)
# Gaps:           3/153 ( 2.0%)
# Score: 689.5
# 
#
#=======================================

BSNT_02540___      1 MSMKNKLKNFFSMEDEEYEYEYIETERESHEEHEQK--EKPAYTGNKPSG     48
                     |||||||||||||::|||||||||||::..|||||:  ::||| ..||.|
RBAM_015220__      1 MSMKNKLKNFFSMDEEEYEYEYIETEQDHPEEHEQQKDKQPAY-AQKPQG     49

BSNT_02540___     49 KQNVVSLQSVQKSSKVVLSEPRVYAEAQEIADHLKNRRAVVVNLQRIQHD     98
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_015220__     50 KQNVVSLQSVQKSSKVVLSEPRVYAEAQEIADHLKNRRAVVVNLQRIQHD     99

BSNT_02540___     99 QAKRIVDFLSGTVYAIGGDIQRIGSDIFLCTPDNVDVSGTISELISEDEH    148
                     |||||||||||||||||||||||||||||||||||||||||||||:||||
RBAM_015220__    100 QAKRIVDFLSGTVYAIGGDIQRIGSDIFLCTPDNVDVSGTISELINEDEH    149

BSNT_02540___    149 QRW    151
                     |||
RBAM_015220__    150 QRW    152


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