Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02537 and RBAM_015190

See DNA alignment / Visit BSNT_02537 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:20
# Commandline: needle
#    -asequence pep-align/BSNT_02537___ylmC.1.9828.seq
#    -bsequence pep-align/RBAM_015190___ylmC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02537___ylmC-RBAM_015190___ylmC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02537___ylmC-RBAM_015190___ylmC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02537___ylmC
# 2: RBAM_015190___ylmC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 83
# Identity:      73/83 (88.0%)
# Similarity:    79/83 (95.2%)
# Gaps:           2/83 ( 2.4%)
# Score: 377.0
# 
#
#=======================================

BSNT_02537___      1 MISISEFQVKDVVNVSNGKKLGSIGDIDINVTTGKIQAIILGGNGKVLGF     50
                     ||||||||:||||||||||||||||||||||||||||||||||:||||||
RBAM_015190__      1 MISISEFQIKDVVNVSNGKKLGSIGDIDINVTTGKIQAIILGGSGKVLGF     50

BSNT_02537___     51 FGKEEELVIPWRNIVKIGEDVILVRLSEPHA--     81
                     ||||||::|||||||||||||||||::||..  
RBAM_015190__     51 FGKEEEMIIPWRNIVKIGEDVILVRVNEPKGGA     83


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