Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02537 and RBAM_015190

See Amino acid alignment / Visit BSNT_02537 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:20
# Commandline: needle
#    -asequence dna-align/BSNT_02537___ylmC.1.9828.seq
#    -bsequence dna-align/RBAM_015190___ylmC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02537___ylmC-RBAM_015190___ylmC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02537___ylmC-RBAM_015190___ylmC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02537___ylmC
# 2: RBAM_015190___ylmC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 252
# Identity:     202/252 (80.2%)
# Similarity:   202/252 (80.2%)
# Gaps:           6/252 ( 2.4%)
# Score: 821.5
# 
#
#=======================================

BSNT_02537___      1 ATGATCAGCATTTCAGAATTTCAGGTAAAGGATGTCGTCAATGTCTCAAA     50
                     |||||||||||.||.||||||||..||||.|||||.||.||.||.||.||
RBAM_015190__      1 ATGATCAGCATATCTGAATTTCAAATAAAAGATGTGGTAAACGTGTCGAA     50

BSNT_02537___     51 CGGAAAAAAGCTGGGGAGTATTGGTGATATTGATATCAATGTGACCACTG    100
                     |||||||||.||.||.||.||.||||||||||||||.||.|||||.||.|
RBAM_015190__     51 CGGAAAAAAACTCGGAAGCATCGGTGATATTGATATTAACGTGACAACGG    100

BSNT_02537___    101 GAAAAATTCAGGCGATCATACTCGGAGGAAATGGGAAAGTTCTCGGATTT    150
                     ||||||||||||||||.||..|.||.||.|..||.|||||||||||.|||
RBAM_015190__    101 GAAAAATTCAGGCGATTATTTTAGGCGGCAGCGGAAAAGTTCTCGGTTTT    150

BSNT_02537___    151 TTTGGAAAAGAAGAGGAATTGGTCATTCCATGGCGAAATATAGTAAAAAT    200
                     ||.|||||||||||||||.||.|||||||.||||||||||||||.|||||
RBAM_015190__    151 TTCGGAAAAGAAGAGGAAATGATCATTCCTTGGCGAAATATAGTTAAAAT    200

BSNT_02537___    201 CGGGGAAGATGTAATCTTAGTCCGATTAAGTGAACCACA------TGCAT    244
                     .|||||||||||.||||||||.||..|||..||||||.|      .||.|
RBAM_015190__    201 TGGGGAAGATGTCATCTTAGTGCGTGTAAACGAACCAAAGGGGGGAGCGT    250

BSNT_02537___    245 AA    246
                     ||
RBAM_015190__    251 AA    252


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