Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02535 and RBAM_015180
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:20
# Commandline: needle
# -asequence pep-align/BSNT_02535___ylmB.1.9828.seq
# -bsequence pep-align/RBAM_015180___ylmB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02535___ylmB-RBAM_015180___ylmB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02535___ylmB-RBAM_015180___ylmB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02535___ylmB
# 2: RBAM_015180___ylmB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 452
# Identity: 321/452 (71.0%)
# Similarity: 372/452 (82.3%)
# Gaps: 28/452 ( 6.2%)
# Score: 1783.0
#
#
#=======================================
BSNT_02535___ 1 MFLLSRFITFETAFLILKNRSGFTLDQQIDSLQKKVEEQKEELIQLAKTL 50
..|||.|..:.|:::.:.|.:|:.|
RBAM_015180__ 1 -------------------------MHQIDMLLHQAEKRRHDFIHIAERL 25
BSNT_02535___ 51 ISYQTPAPPARNTEGIQSWIAGFLNELGFSIDKWDVYPGDPNVVGKLKGT 100
|::.|||||||||...|.|:||||.|.|.|:|.|||||.||||||.||||
RBAM_015180__ 26 IAFPTPAPPARNTAEAQKWVAGFLKETGCSVDMWDVYPEDPNVVGVLKGT 75
BSNT_02535___ 101 DSADYYSLIINGHVDVAEVKEDEEWKHDPFHPIEKNGLLIGRGASDMKGG 150
||:.:.|||:|||:||||. ..|:|..|||.||.|:|:||||||:|||||
RBAM_015180__ 76 DSSRHQSLILNGHIDVAEA-GGEDWHSDPFQPIVKDGMLIGRGAADMKGG 124
BSNT_02535___ 151 MACVLFAVKLIREAGIELPGDLILQSVIGEEVGEAGTLECCKRGYHADFA 200
:|||||::|||.:||||||||||:||||||||||||||||||||||||||
RBAM_015180__ 125 LACVLFSLKLIHDAGIELPGDLIVQSVIGEEVGEAGTLECCKRGYHADFA 174
BSNT_02535___ 201 IVADTSDMHIQGQGGVITGWIEIKSSQTFHDGTRRNMIHAGGGTFGASAI 250
:|||||.:||||||||||||||:||.||||||.|||||||||||||||||
RBAM_015180__ 175 VVADTSSLHIQGQGGVITGWIELKSKQTFHDGMRRNMIHAGGGTFGASAI 224
BSNT_02535___ 251 EKMAKIIAGLGELERHWSIMKSYPGFKPGTNTINPAVIEGGRHAAFIADE 300
|||||||..||||||||::.||||||.|||||||||||||||||||:|||
RBAM_015180__ 225 EKMAKIITALGELERHWAVTKSYPGFAPGTNTINPAVIEGGRHAAFVADE 274
BSNT_02535___ 301 CRLWITVHFYPNETHDQVAAEIEDYVNRLSDSDIWLRENRPVFKWGGSSM 350
|||||||||||||||:|.|||||||:||::|||:||:|||||||||||||
RBAM_015180__ 275 CRLWITVHFYPNETHEQAAAEIEDYINRVADSDLWLKENRPVFKWGGSSM 324
BSNT_02535___ 351 IEDRGEIFPALEVDPGHPGVLVLTASHQKVKRECPIIDVSQSVTDGGWLY 400
||||||:|||||:||.||.|.||.|||..||::.|:|||||:||||||||
RBAM_015180__ 325 IEDRGEVFPALEIDPDHPAVSVLAASHSAVKKQEPVIDVSQTVTDGGWLY 374
BSNT_02535___ 401 DAGIPCVIYGPGDLHNAHSVNEKVSIEQLVEYTKIILDFIISWCSRKKEQ 450
.||||.||||||||.|||||||:||:::|::||||:|.||:.||||||:.
RBAM_015180__ 375 HAGIPSVIYGPGDLKNAHSVNEEVSVDELMDYTKIMLRFILGWCSRKKDC 424
BSNT_02535___ 450 -- 450
RBAM_015180__ 425 PM 426
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