Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02535 and RBAM_015180

See DNA alignment / Visit BSNT_02535 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:20
# Commandline: needle
#    -asequence pep-align/BSNT_02535___ylmB.1.9828.seq
#    -bsequence pep-align/RBAM_015180___ylmB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02535___ylmB-RBAM_015180___ylmB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02535___ylmB-RBAM_015180___ylmB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02535___ylmB
# 2: RBAM_015180___ylmB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 452
# Identity:     321/452 (71.0%)
# Similarity:   372/452 (82.3%)
# Gaps:          28/452 ( 6.2%)
# Score: 1783.0
# 
#
#=======================================

BSNT_02535___      1 MFLLSRFITFETAFLILKNRSGFTLDQQIDSLQKKVEEQKEELIQLAKTL     50
                                              ..|||.|..:.|:::.:.|.:|:.|
RBAM_015180__      1 -------------------------MHQIDMLLHQAEKRRHDFIHIAERL     25

BSNT_02535___     51 ISYQTPAPPARNTEGIQSWIAGFLNELGFSIDKWDVYPGDPNVVGKLKGT    100
                     |::.|||||||||...|.|:||||.|.|.|:|.|||||.||||||.||||
RBAM_015180__     26 IAFPTPAPPARNTAEAQKWVAGFLKETGCSVDMWDVYPEDPNVVGVLKGT     75

BSNT_02535___    101 DSADYYSLIINGHVDVAEVKEDEEWKHDPFHPIEKNGLLIGRGASDMKGG    150
                     ||:.:.|||:|||:||||. ..|:|..|||.||.|:|:||||||:|||||
RBAM_015180__     76 DSSRHQSLILNGHIDVAEA-GGEDWHSDPFQPIVKDGMLIGRGAADMKGG    124

BSNT_02535___    151 MACVLFAVKLIREAGIELPGDLILQSVIGEEVGEAGTLECCKRGYHADFA    200
                     :|||||::|||.:||||||||||:||||||||||||||||||||||||||
RBAM_015180__    125 LACVLFSLKLIHDAGIELPGDLIVQSVIGEEVGEAGTLECCKRGYHADFA    174

BSNT_02535___    201 IVADTSDMHIQGQGGVITGWIEIKSSQTFHDGTRRNMIHAGGGTFGASAI    250
                     :|||||.:||||||||||||||:||.||||||.|||||||||||||||||
RBAM_015180__    175 VVADTSSLHIQGQGGVITGWIELKSKQTFHDGMRRNMIHAGGGTFGASAI    224

BSNT_02535___    251 EKMAKIIAGLGELERHWSIMKSYPGFKPGTNTINPAVIEGGRHAAFIADE    300
                     |||||||..||||||||::.||||||.|||||||||||||||||||:|||
RBAM_015180__    225 EKMAKIITALGELERHWAVTKSYPGFAPGTNTINPAVIEGGRHAAFVADE    274

BSNT_02535___    301 CRLWITVHFYPNETHDQVAAEIEDYVNRLSDSDIWLRENRPVFKWGGSSM    350
                     |||||||||||||||:|.|||||||:||::|||:||:|||||||||||||
RBAM_015180__    275 CRLWITVHFYPNETHEQAAAEIEDYINRVADSDLWLKENRPVFKWGGSSM    324

BSNT_02535___    351 IEDRGEIFPALEVDPGHPGVLVLTASHQKVKRECPIIDVSQSVTDGGWLY    400
                     ||||||:|||||:||.||.|.||.|||..||::.|:|||||:||||||||
RBAM_015180__    325 IEDRGEVFPALEIDPDHPAVSVLAASHSAVKKQEPVIDVSQTVTDGGWLY    374

BSNT_02535___    401 DAGIPCVIYGPGDLHNAHSVNEKVSIEQLVEYTKIILDFIISWCSRKKEQ    450
                     .||||.||||||||.|||||||:||:::|::||||:|.||:.||||||:.
RBAM_015180__    375 HAGIPSVIYGPGDLKNAHSVNEEVSVDELMDYTKIMLRFILGWCSRKKDC    424

BSNT_02535___    450 --    450
                       
RBAM_015180__    425 PM    426


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