Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02533 and RBAM_015170

See DNA alignment / Visit BSNT_02533 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:19
# Commandline: needle
#    -asequence pep-align/BSNT_02533___ylmA.1.9828.seq
#    -bsequence pep-align/RBAM_015170___ylmA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02533___ylmA-RBAM_015170___ylmA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02533___ylmA-RBAM_015170___ylmA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02533___ylmA
# 2: RBAM_015170___ylmA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 265
# Identity:     221/265 (83.4%)
# Similarity:   247/265 (93.2%)
# Gaps:           1/265 ( 0.4%)
# Score: 1149.0
# 
#
#=======================================

BSNT_02533___      1 MILQLDNVSLKRNGKWILRDIHWKVEEKENWVLYGLNGAGKTALLNMLCS     50
                     ||||||:|||||||||||:||:|:||:.||||||||||||||||||||||
RBAM_015170__      1 MILQLDSVSLKRNGKWILKDINWRVEKNENWVLYGLNGAGKTALLNMLCS     50

BSNT_02533___     51 YYFPTSGEMQVLGHEFGKTELGEKLRRKIGLVSAALQQKLYPADSAFEIA    100
                     ||||||||||||||:|||||||::||||||||||.||.|||.||||||||
RBAM_015170__     51 YYFPTSGEMQVLGHQFGKTELGDRLRRKIGLVSAGLQHKLYAADSAFEIA    100

BSNT_02533___    101 LSGAYASIGLYETPSKETREKAIGLLEDLGAIEYADRRYETLSQGEKQRA    150
                     |||||||||||||||::.||||||||:|||||.|||||||||||||:|||
RBAM_015170__    101 LSGAYASIGLYETPSEQVREKAIGLLKDLGAIGYADRRYETLSQGERQRA    150

BSNT_02533___    151 LIARALMADPELLILDEPVTGLDFIAREKLLDTITYIANKENAPSILYVT    200
                     ||||||||||||||||||||||||:|||:||||||.||.|||||||||||
RBAM_015170__    151 LIARALMADPELLILDEPVTGLDFMAREQLLDTITSIAEKENAPSILYVT    200

BSNT_02533___    201 HHAEEILPVFDKALLLKQGEVFGSGEIKEMLTDQVLSAFFDTPIHVLWNQ    250
                     |||||||||||:|||||||||:.||:|::||:|:.|:||||.|::||||.
RBAM_015170__    201 HHAEEILPVFDQALLLKQGEVYASGKIRDMLSDERLTAFFDMPVNVLWNN    250

BSNT_02533___    251 DRPFLTRAEPITNA-    264
                     .|||||||:..:.. 
RBAM_015170__    251 GRPFLTRAKEASYVK    265


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