Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02530 and RBAM_015140

See DNA alignment / Visit BSNT_02530 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:19
# Commandline: needle
#    -asequence pep-align/BSNT_02530___spoIIGA.1.9828.seq
#    -bsequence pep-align/RBAM_015140___spoIIGA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02530___spoIIGA-RBAM_015140___spoIIGA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02530___spoIIGA-RBAM_015140___spoIIGA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02530___spoIIGA
# 2: RBAM_015140___spoIIGA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     237/309 (76.7%)
# Similarity:   272/309 (88.0%)
# Gaps:           0/309 ( 0.0%)
# Score: 1278.0
# 
#
#=======================================

BSNT_02530___      1 MKIYLDVIWLLNFCFDALLLLLTAFILKRHVKKRRLVGGAFIGSSIVLLM     50
                     ||||||||||||||||:||||||||||||.|||||:..|.||||:|||||
RBAM_015140__      1 MKIYLDVIWLLNFCFDSLLLLLTAFILKRQVKKRRVAAGGFIGSAIVLLM     50

BSNT_02530___     51 FTPFSPIVEHPAGKLAFSVVIVVVTFGFKRFRFFFQNLFSFYFATFLMGG    100
                     |||.||.|||||||:|||||||:..|||||||:||||||:|||||||:||
RBAM_015140__     51 FTPVSPFVEHPAGKMAFSVVIVLAAFGFKRFRYFFQNLFAFYFATFLVGG    100

BSNT_02530___    101 GIIGAHSLLQSNSIVQNGVMITNQTGFGDPISWLFIVAGFPALWFFSKRR    150
                     |:||.|||||:.||||.|||:|:||||||||||:|:|.||||:|||||:|
RBAM_015140__    101 GMIGVHSLLQTESIVQQGVMVTSQTGFGDPISWMFVVIGFPAIWFFSKKR    150

BSNT_02530___    151 IEDIETKNIQYEERVSVQADLGSQTLHVRGLIDSGNQLYDPLTKTPVMII    200
                     |||||||:|||:|.|.|||:...||:..:||:|||||||||||||||||:
RBAM_015140__    151 IEDIETKSIQYDELVMVQAEFSGQTIRAKGLVDSGNQLYDPLTKTPVMIL    200

BSNT_02530___    201 YIDKLEPIFGTAETMIIRNTDPLEAIEQLDDSFRFLDKMRLIPYRGVGQQ    250
                     .|||..||....||.:|::..|||.|||||||||..||:||||||||||.
RBAM_015140__    201 CIDKFAPILSEKETDLIKSASPLEVIEQLDDSFRHADKLRLIPYRGVGQD    250

BSNT_02530___    251 NQFLLCVKPDHVTIMTKEEMISADKCLIGISTTKLSADGEFDAIIHPKML    300
                     ||||||:|||:|||:||:|||:.:||||||||..||||||||.|:|||||
RBAM_015140__    251 NQFLLCLKPDYVTILTKDEMIACEKCLIGISTKPLSADGEFDGIVHPKML    300

BSNT_02530___    301 SGKAVKHVS    309
                     :||||||||
RBAM_015140__    301 TGKAVKHVS    309


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