Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02530 and RBAM_015140
See
Amino acid alignment /
Visit
BSNT_02530 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:19
# Commandline: needle
# -asequence dna-align/BSNT_02530___spoIIGA.1.9828.seq
# -bsequence dna-align/RBAM_015140___spoIIGA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02530___spoIIGA-RBAM_015140___spoIIGA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02530___spoIIGA-RBAM_015140___spoIIGA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02530___spoIIGA
# 2: RBAM_015140___spoIIGA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 940
# Identity: 707/940 (75.2%)
# Similarity: 707/940 (75.2%)
# Gaps: 20/940 ( 2.1%)
# Score: 2549.5
#
#
#=======================================
BSNT_02530___ 1 GTGAAAATCTATTTAGATGTCATTTGGCTGTTAAACTTTTGTTTTGATGC 50
||||||||||||.|.|||||||||||||||||.|||||||||||||||.|
RBAM_015140__ 1 GTGAAAATCTATCTGGATGTCATTTGGCTGTTGAACTTTTGTTTTGATTC 50
BSNT_02530___ 51 ACTTTTGCTTTTGCTCACGGCATTTATTTTAAAACGGCATGTAAAAAAAA 100
.|||||||||||..|.||.||.||||||||||||||.||.||.|||||||
RBAM_015140__ 51 TCTTTTGCTTTTATTGACCGCCTTTATTTTAAAACGCCAGGTGAAAAAAA 100
BSNT_02530___ 101 GAAGACTGGTAGGCGGAGCGTTCATCGGTTCCAG-TATTGTCCTTTTGAT 149
|||||.|||..|.|||.|..||||||||.| ||| .|||||.|||.||||
RBAM_015140__ 101 GAAGAGTGGCCGCCGGCGGTTTCATCGGGT-CAGCCATTGTGCTTCTGAT 149
BSNT_02530___ 150 GTTTACTCCTTTTTCGCCGATTGTTGAACATCCGGCTGGGAAGCTAGCTT 199
||||||.|||.||||.||..||||.||.||||||||.||.||..|.||.|
RBAM_015140__ 150 GTTTACGCCTGTTTCTCCCTTTGTGGAGCATCCGGCGGGAAAAATGGCGT 199
BSNT_02530___ 200 TTTCAGTTGTGATTGTGGTGGTGACATTTGGCTTTAAAAGATTTCGGTTT 249
|||||||.||.||.|||.|.|.|.|.||||||||||||.|.||.||.|..
RBAM_015140__ 200 TTTCAGTAGTCATCGTGCTTGCGGCTTTTGGCTTTAAACGGTTCCGATAC 249
BSNT_02530___ 250 TTCTTTCAAAATTTGTTTTCCTTTTATTTTGCCACTTTTTTAATGGGGGG 299
||.||||||||||||||..||||||||||.||.||||||.|..|.||.||
RBAM_015140__ 250 TTTTTTCAAAATTTGTTCGCCTTTTATTTCGCGACTTTTCTCGTCGGCGG 299
BSNT_02530___ 300 AGGAATTATCGGAGCCCATTCTTTGCTGCAGTCAAATTCTATTGTTCAAA 349
.|||||.|||||.|..|||||..||||||||.||.|.||.|||||.||..
RBAM_015140__ 300 GGGAATGATCGGCGTACATTCCCTGCTGCAGACAGAATCAATTGTGCAGC 349
BSNT_02530___ 350 ACGGTGTCATGATTACCAATCAAACAGGGTTTGGAGACCCGATCAGCTGG 399
|.||.||.|||.|.||.|..||.||.||.||.||.|||||||||||||||
RBAM_015140__ 350 AAGGCGTAATGGTCACAAGCCAGACCGGATTCGGCGACCCGATCAGCTGG 399
BSNT_02530___ 400 TTGTTTATTGTTGCTGGCTTTCCAGCATTATGGTTTTTTTCTAAAAGAAG 449
.|||||.|.|||...||.|||||.||..|||||||||||||.||||..||
RBAM_015140__ 400 ATGTTTGTAGTTATCGGATTTCCGGCCATATGGTTTTTTTCGAAAAAGAG 449
BSNT_02530___ 450 AATTGAAGATATTGAAACAAAAAACATTCAATATGAGGAACGAGTCAGCG 499
|||||||||.||.||.||.||...||||||.||.||.||||..||||..|
RBAM_015140__ 450 AATTGAAGACATCGAGACGAAGTCCATTCAGTACGATGAACTTGTCATGG 499
BSNT_02530___ 500 TGCAGGCAGATTTGGGCAGCCAAACACTTCATGTCAGAGGCCTGATTGAT 549
|||||||.||.||..||.|.||.|||.|.|..|..|.|||..||.|.|||
RBAM_015140__ 500 TGCAGGCGGAATTCAGCGGACAGACAATCCGCGCGAAAGGATTGGTGGAT 549
BSNT_02530___ 550 TCCGGTAATCAGCTGTACGATCCTCTTACAAAAACACCGGTAATGATCAT 599
|||||.|||||||||||.|||||.||.||.|||||.|||||.||||||.|
RBAM_015140__ 550 TCCGGGAATCAGCTGTATGATCCGCTGACGAAAACGCCGGTCATGATCCT 599
BSNT_02530___ 600 TTACATTGATAAACTGGAGCCGATTTTC--GGAACAGCCGAAACGATGA- 646
||.||||||.|||.|.|..||||||.|| .|||.|| |||||| ||
RBAM_015140__ 600 TTGCATTGACAAATTCGCTCCGATTCTCAGCGAAAAG--GAAACG--GAC 645
BSNT_02530___ 647 -TCATTCGAAAC--ACAGACCCATTGGAAGCCATCGAACAGCTCGATGAT 693
||| ||.||.| .|||.||..|| ||||..||.||.|||||.||||||
RBAM_015140__ 646 CTCA-TCAAATCCGCCAGTCCGCTT-GAAGTGATAGAGCAGCTTGATGAT 693
BSNT_02530___ 694 TCCTTTCGCTTTTTAGATAAAATGAGGTTGATTCCATACAGGGGAGTTGG 743
||.||.|||..|...|||||..|||||.||||||||||||||||.||.||
RBAM_015140__ 694 TCGTTCCGCCATGCGGATAAGCTGAGGCTGATTCCATACAGGGGCGTCGG 743
BSNT_02530___ 744 TCAGCAAAATCAATTTTTATTATGCGTTAAA-CCGGATCACGTAACGATT 792
.|||.|.||||||||||||.|.|| .||||| ||||||.||||.||||||
RBAM_015140__ 744 CCAGGACAATCAATTTTTACTCTG-TTTAAAGCCGGATTACGTCACGATT 792
BSNT_02530___ 793 ATGACAAAAGAAGAAATGATCTCTGCAGATAAATGTTTAATCGGCATCAG 842
.|.||||||||.|||||||||.||...||.|||||..|.|||||||||||
RBAM_015140__ 793 TTAACAAAAGACGAAATGATCGCTTGTGAAAAATGCCTGATCGGCATCAG 842
BSNT_02530___ 843 CAC--AACAAAGCTGTCGGCAGATGGAGAGTTTGACGCGATTATTCATCC 890
||| |||.| .|.||.||.||.||.||.|||||||..||..|||||||
RBAM_015140__ 843 CACGAAACCA--TTATCCGCGGACGGTGAATTTGACGGAATCGTTCATCC 890
BSNT_02530___ 891 GAAAATGCTTTCGGGCAAGGCTGTCAAACACGTTTCATAA 930
|||.|||||..|.||.||||||||.|||||.|||||.|.|
RBAM_015140__ 891 GAAGATGCTGACAGGGAAGGCTGTAAAACATGTTTCCTGA 930
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.