Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02516 and RBAM_015090

See DNA alignment / Visit BSNT_02516 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:17
# Commandline: needle
#    -asequence pep-align/BSNT_02516___murB.1.9828.seq
#    -bsequence pep-align/RBAM_015090___murB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02516___murB-RBAM_015090___murB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02516___murB-RBAM_015090___murB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02516___murB
# 2: RBAM_015090___murB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity:     265/303 (87.5%)
# Similarity:   294/303 (97.0%)
# Gaps:           0/303 ( 0.0%)
# Score: 1412.0
# 
#
#=======================================

BSNT_02516___      1 MEKVIQELKEREVGKVLANEPLANHTTMKIGGPADVLVIPSSVDAVKDIM     50
                     ||.|||||::|||||||..||||||||||||||||:|:||:.|:||||||
RBAM_015090__      1 MENVIQELRDREVGKVLEQEPLANHTTMKIGGPADILIIPNRVEAVKDIM     50

BSNT_02516___     51 DVIKKYDVKWTVIGRGSNLLVLDEGIRGVVIKLGAGLDHLELEGEQVTVG    100
                     |::||:|:.||||||||||||||||||||||||||||||||::|:|||||
RBAM_015090__     51 DIVKKHDLPWTVIGRGSNLLVLDEGIRGVVIKLGAGLDHLEIDGDQVTVG    100

BSNT_02516___    101 GGYSVVRLATSLSKKGLSGLEFAAGIPGSVGGAVYMNAGAHGSDMSEILV    150
                     |||||||||||:||||:||||||||||||:||||||||||||||||||||
RBAM_015090__    101 GGYSVVRLATSMSKKGMSGLEFAAGIPGSIGGAVYMNAGAHGSDMSEILV    150

BSNT_02516___    151 KAHILFEDGTIEWLTNEQMDFSYRTSVLQKKRPGVCLEAVLQLEQKDKES    200
                     ||.||||||||||||||:||||||||||||||||||||||||||||::|:
RBAM_015090__    151 KARILFEDGTIEWLTNEEMDFSYRTSVLQKKRPGVCLEAVLQLEQKEREA    200

BSNT_02516___    201 IVQQMQSNKDYRKNTQPYSSPCAGSIFRNPLPNHAGNLVEKAGLKGYQIG    250
                     |..|||.|||||||||||||||||||||||||:|||||||||||||:|||
RBAM_015090__    201 ITAQMQQNKDYRKNTQPYSSPCAGSIFRNPLPDHAGNLVEKAGLKGHQIG    250

BSNT_02516___    251 GAKISEMHGNFIVNAGGASAKDVLDLIDHVKKTIREKYEIDMHTEVEIIG    300
                     |||:||||||||||||||:||||||||::|||||||:|::||||||||||
RBAM_015090__    251 GAKVSEMHGNFIVNAGGATAKDVLDLIEYVKKTIREQYDVDMHTEVEIIG    300

BSNT_02516___    301 GNR    303
                     |||
RBAM_015090__    301 GNR    303


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