Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02516 and RBAM_015090
See
Amino acid alignment /
Visit
BSNT_02516 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:18
# Commandline: needle
# -asequence dna-align/BSNT_02516___murB.1.9828.seq
# -bsequence dna-align/RBAM_015090___murB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02516___murB-RBAM_015090___murB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02516___murB-RBAM_015090___murB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02516___murB
# 2: RBAM_015090___murB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 916
# Identity: 731/916 (79.8%)
# Similarity: 731/916 (79.8%)
# Gaps: 8/916 ( 0.9%)
# Score: 2905.0
#
#
#=======================================
BSNT_02516___ 1 ATGGAGAAAGTGATACAGGAATTAAAAGAACGCGAAGTCGGCAAGGTTCT 50
||||||||.||.||.||||||||||.|||.||||||||||||||.||.||
RBAM_015090__ 1 ATGGAGAACGTAATTCAGGAATTAAGAGACCGCGAAGTCGGCAAAGTGCT 50
BSNT_02516___ 51 TGCAAATGAACCGCTCGCGAATCATACAACGATGAAAATCGGCGGACCTG 100
.|.|.|.||||||||||||||.|||||||||||||||||||||||.||.|
RBAM_015090__ 51 GGAACAAGAACCGCTCGCGAACCATACAACGATGAAAATCGGCGGTCCGG 100
BSNT_02516___ 101 CGGATGTATTGGTCATTCCAAGCAGTGTAGATGCTGTTAAAGACATCATG 150
||||..|.||..||||.||.|.|.||||.||.||.||.|||||.||.|||
RBAM_015090__ 101 CGGACATTTTAATCATCCCCAACCGTGTGGAAGCGGTCAAAGATATTATG 150
BSNT_02516___ 151 GACGTGATTAAAAAATATGATGTGAAGTGGACAGTCATCGGCCGCGGATC 200
||..|..|.||.|||.|||||.||...|||||.||.|||||||||||.||
RBAM_015090__ 151 GATATTGTGAAGAAACATGATCTGCCATGGACGGTTATCGGCCGCGGTTC 200
BSNT_02516___ 201 AAATCTTCTTGTTTTAGATGAAGGAATTAGAGGCGTAGTGATCAAGCTGG 250
||||||.||.||..|.||||||||.||.|||||.||.||.||||||||||
RBAM_015090__ 201 AAATCTGCTCGTGCTTGATGAAGGCATAAGAGGAGTTGTCATCAAGCTGG 250
BSNT_02516___ 251 GTGCGGGTCTTGACCATTTGGAGCTTGAAGGGGAACAAGTAACAGTCGGA 300
|.||||||||.||.|||||||||.||||.||.||.||.||.||.||||||
RBAM_015090__ 251 GAGCGGGTCTGGATCATTTGGAGATTGACGGTGATCAGGTGACGGTCGGA 300
BSNT_02516___ 301 GGCGGTTATTCAGTGGTCCGCCTTGCTACATCATTGAGCAAAAAAGGCCT 350
|||||.|||||.||.|||||.|||||.||.||..||||.||||||||..|
RBAM_015090__ 301 GGCGGCTATTCGGTCGTCCGGCTTGCGACTTCCATGAGTAAAAAAGGAAT 350
BSNT_02516___ 351 GTCCGGTTTGGAATTTGCTGCCGGCATTCCAGGATCAGTCGGCGGAGCGG 400
|||||||.|.||||||||.||.||||||||.||||||.||||||||||.|
RBAM_015090__ 351 GTCCGGTCTCGAATTTGCAGCGGGCATTCCCGGATCAATCGGCGGAGCCG 400
BSNT_02516___ 401 TTTATATGAATGCCGGCGCTCACGGTTCTGATATGAGCGAGATTCTCGTC 450
|.||||||||||||||.||.|||||.|||||||||||.||||||||.||.
RBAM_015090__ 401 TCTATATGAATGCCGGGGCGCACGGATCTGATATGAGTGAGATTCTTGTG 450
BSNT_02516___ 451 AAAGCGCATATTTTATTTGAAGACGGAACGATTGAGTGGCTGACAAATGA 500
|||||.|.|||.||||||||||||||.||.||.||.|||||||||||.||
RBAM_015090__ 451 AAAGCCCGTATCTTATTTGAAGACGGCACAATCGAATGGCTGACAAACGA 500
BSNT_02516___ 501 GCAGATGGATTTCAGCTACAGGACATCTGTACTGCAAAAGAAACGCCCGG 550
..|||||||||||||||||||.||.|||||..||||.||.||||||||.|
RBAM_015090__ 501 AGAGATGGATTTCAGCTACAGAACGTCTGTTTTGCAGAAAAAACGCCCCG 550
BSNT_02516___ 551 GCGTTTGCCTTGAAGCTGTTTTGCAGCTGGAGCAGAAGGATAAGGAATCA 600
|.||.||.||.||.||.|||.|.|||||.|||||.|||||...||||.|.
RBAM_015090__ 551 GTGTCTGTCTCGAGGCAGTTCTTCAGCTTGAGCAAAAGGAACGGGAAGCC 600
BSNT_02516___ 601 AT--CGTTCAGCAAATGCAAAGC--AATAAAGACTATAGAAAAAATACAC 646
|| || ..|||||||| ||| ||.|||||.||.||||||||.||.|
RBAM_015090__ 601 ATTACG--GCGCAAATGC--AGCAGAACAAAGATTACAGAAAAAACACTC 646
BSNT_02516___ 647 AGCCGTATTCAAGCCCTTGTGCGGGAAGCATATTCAGAAATCCGCTTCCG 696
||||||||||||||||.||.||.||.||||||||||||||||||||.|||
RBAM_015090__ 647 AGCCGTATTCAAGCCCATGCGCCGGGAGCATATTCAGAAATCCGCTGCCG 696
BSNT_02516___ 697 AATCATGCCGGGAACCTTGTAGAAAAAGCAGGCTTGAAAGGATATCAAAT 746
.||||||||||.|||||.||.||||||||.||.||.||||||.||||.||
RBAM_015090__ 697 GATCATGCCGGAAACCTCGTTGAAAAAGCGGGATTAAAAGGACATCAGAT 746
BSNT_02516___ 747 CGGCGGTGCAAAGATATCGGAGATGCACGGAAACTTCATCGTCAATGCGG 796
||||||.|||||..|.||.||.||||||||.||.||.|||||||||||.|
RBAM_015090__ 747 CGGCGGAGCAAAAGTGTCCGAAATGCACGGGAATTTTATCGTCAATGCCG 796
BSNT_02516___ 797 GAGGAGCATCAGCAAAAGATGTGCTTGATCTCATTGACCATGTGAAAAAG 846
|.|||||..|.||.||.||.||.||.||.||.|||||..|||||||||||
RBAM_015090__ 797 GCGGAGCGACTGCCAAGGACGTTCTCGACCTGATTGAATATGTGAAAAAG 846
BSNT_02516___ 847 ACAATCCGTGAAAAATACGAGATTGATATGCACACAGAGGTTGAAATCAT 896
|||||||||||..|.||.||..||||.|||||.|||||.|||||||||||
RBAM_015090__ 847 ACAATCCGTGAGCAGTATGATGTTGACATGCATACAGAAGTTGAAATCAT 896
BSNT_02516___ 897 CGGCGGAAATCGCTGA 912
|||.||.|||||.|.|
RBAM_015090__ 897 CGGAGGGAATCGTTAA 912
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.