Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02507 and RBAM_015020
See
DNA alignment /
Visit
BSNT_02507 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:16
# Commandline: needle
# -asequence pep-align/BSNT_02507___pbpB.1.9828.seq
# -bsequence pep-align/RBAM_015020___pbpB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02507___pbpB-RBAM_015020___pbpB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02507___pbpB-RBAM_015020___pbpB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02507___pbpB
# 2: RBAM_015020___pbpB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 717
# Identity: 585/717 (81.6%)
# Similarity: 660/717 (92.1%)
# Gaps: 4/717 ( 0.6%)
# Score: 3098.0
#
#
#=======================================
BSNT_02507___ 1 MIQMPKKNKFMNRGAAILSICFALFFFVILGRMAYIQITGKANGEVLATK 50
||||||||||||||||||||||||||||||||||:||||||..||||
RBAM_015020__ 1 ---MPKKNKFMNRGAAILSICFALFFFVILGRMAYIQLTGKANGVELATK 47
BSNT_02507___ 51 ATEQHEKKRTIEASRGSILDRKGKVIAEDTATYKLIAILDKKMTTDVKHP 100
|||||||||||||||||||||.|||:|||||||||||:||||||:|.|||
RBAM_015020__ 48 ATEQHEKKRTIEASRGSILDRNGKVLAEDTATYKLIAVLDKKMTSDPKHP 97
BSNT_02507___ 101 QHVVNKEKTAEALSKVINLDKADILDILNKD-AKQVEFGSAGRDITYSQK 149
|||.:||||||.|:.||||||::||||||:| |||||||||||||:|::|
RBAM_015020__ 98 QHVKDKEKTAEKLATVINLDKSEILDILNRDGAKQVEFGSAGRDISYAKK 147
BSNT_02507___ 150 QKIEKMKLPGISFLRDTKRYYPNGIFASNLIGYAEVDQDTNEISGAMGLE 199
||||||.|||||||||||||||||:|.||::|||:|::.||||.|::|||
RBAM_015020__ 148 QKIEKMNLPGISFLRDTKRYYPNGVFLSNVLGYADVNEKTNEIQGSLGLE 197
BSNT_02507___ 200 KVLDKYLKERDGYVTYESDKSGWELPNSKNKITAPKNGDNVYLTIDQNIQ 249
|:|:.||.||||.||||||||||:|||||.|||||||||||||||||.||
RBAM_015020__ 198 KILNNYLTERDGSVTYESDKSGWKLPNSKEKITAPKNGDNVYLTIDQKIQ 247
BSNT_02507___ 250 TFLEDSMTKVAQKYNPKKIMAAVVDPKTGKVLAMGQRPSFDPNKRDVTNY 299
|||||||||||:||.|||||||||:||||||||||||||||||.|:||||
RBAM_015020__ 248 TFLEDSMTKVAEKYKPKKIMAAVVEPKTGKVLAMGQRPSFDPNIRNVTNY 297
BSNT_02507___ 300 YNDLISYAYEPGSTMKIFTLAAAMQENVFNANEKYKSGTFEVGGAPVRDH 349
||||:||||||||||||||||||:|||||:|||||||||::|||.||:|.
RBAM_015020__ 298 YNDLVSYAYEPGSTMKIFTLAAAIQENVFSANEKYKSGTYKVGGGPVKDW 347
BSNT_02507___ 350 NRGIGWGPTTYHDGVLRSSNVAFAKLAKEKLGYDRLNQYLHKFNFYQKTG 399
|.|.|||.|::|||::|||||||||||.||||:||.|:|||||..|||||
RBAM_015020__ 348 NDGAGWGMTSFHDGLMRSSNVAFAKLANEKLGFDRFNEYLHKFGLYQKTG 397
BSNT_02507___ 400 IDLPGEVSSKINFKYEFDKASTAYGQASAVTPIQQIQAATAIANDGKMMK 449
:|||||||||||:||:|||||||||||||:|||||:||.|||||:|||||
RBAM_015020__ 398 VDLPGEVSSKINYKYDFDKASTAYGQASAITPIQQLQAVTAIANNGKMMK 447
BSNT_02507___ 450 PYVIDHIVDPDKDKTIYQNKPESAGTPISASTAKKVRDILGEVVTSKIGT 499
|||||||||||..|.:.|.|||..||||||.||||||::|||||||.|||
RBAM_015020__ 448 PYVIDHIVDPDTKKVVKQTKPEQVGTPISADTAKKVRNLLGEVVTSDIGT 497
BSNT_02507___ 500 GQAYKIEGFDVAGKTGTAQIAGKGGYLDGTDNYIFSFMGMAPKDDPELLI 549
|:.|||||||||||||||||||.||||.||.||:|||||||||:||:|:|
RBAM_015020__ 498 GKPYKIEGFDVAGKTGTAQIAGTGGYLRGTSNYVFSFMGMAPKNDPKLVI 547
BSNT_02507___ 550 YVAVQQPQLKAGQSSSDPVSEIFNPTMKNSLHYLNIEPTEKSDSDKEETK 599
|||||||||||||||||||:|||||||||||||:|||||||:||.:||||
RBAM_015020__ 548 YVAVQQPQLKAGQSSSDPVAEIFNPTMKNSLHYMNIEPTEKTDSGQEETK 597
BSNT_02507___ 600 AQTMPDLTDQTVAAAQKKAKEENLTPIVIGSDVAVKEQYPKADEEVLTNQ 649
:|.||||||:||.:|:|:||.|:|||||||||||||||||.|.|:|:|||
RBAM_015020__ 598 SQKMPDLTDKTVKSAEKEAKNEHLTPIVIGSDVAVKEQYPTAGEDVITNQ 647
BSNT_02507___ 650 KVFLKTGGKIKMPDMTGWSRREVLQYGELAGIHIEVSGQGYAVSQSVKKD 699
|:||||.||:.||||:|||||||||:.:::||||:|||:|||.||||||.
RBAM_015020__ 648 KIFLKTDGKMTMPDMSGWSRREVLQFSKVSGIHIDVSGEGYASSQSVKKG 697
BSNT_02507___ 700 KEIKDKTVIKVKFKNPD 716
||:|:.|||||||||||
RBAM_015020__ 698 KELKENTVIKVKFKNPD 714
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.