Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02502 and RBAM_014970

See DNA alignment / Visit BSNT_02502 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:16
# Commandline: needle
#    -asequence pep-align/BSNT_02502___ylbQ.1.9828.seq
#    -bsequence pep-align/RBAM_014970___ylbQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02502___ylbQ-RBAM_014970___ylbQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02502___ylbQ-RBAM_014970___ylbQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02502___ylbQ
# 2: RBAM_014970___ylbQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 298
# Identity:     190/298 (63.8%)
# Similarity:   223/298 (74.8%)
# Gaps:           5/298 ( 1.7%)
# Score: 984.0
# 
#
#=======================================

BSNT_02502___      1 MKIGIIGGGSVGLLCAYYLSLYHDVTVVTRRQEQAAAIRSEGIRLYKGGE     50
                     |||||||||:||||||||||..|.|||:|||.|||.||.|.||||.|.|.
RBAM_014970__      1 MKIGIIGGGAVGLLCAYYLSSRHQVTVITRRTEQADAINSGGIRLLKDGI     50

BSNT_02502___     51 EFRADCSADTSINSDFDLLVVTVKQHQLQSVFSSLERIGKTNILFLQNGM    100
                     |..|.|.|.|.:.|.||||:..||||||.:|...||.|..||:|||||||
RBAM_014970__     51 ECTAACRAQTGLTSGFDLLIAAVKQHQLSAVLRDLETIKGTNVLFLQNGM    100

BSNT_02502___    101 GHIHDLKDWHVGHSIYVGIVEHGAVRKSDTAVDHTGLGAIKWSAFDDAEP    150
                     |||||:||||..||:|.|.|||||.:.||.||:|||.||::||.|..:.|
RBAM_014970__    101 GHIHDIKDWHTDHSLYAGTVEHGAKKISDHAVEHTGAGAVRWSVFSASRP    150

BSNT_02502___    151 DRLNIMFQHNHSDFPIYYETDWYRLLTGKLIVNACINPLTALLQVKNGEL    200
                     :.|..:|...|.|||:|.|.|||||||||||:|.|||||||||:||||||
RBAM_014970__    151 ETLKSIFSGMHRDFPVYDENDWYRLLTGKLIINVCINPLTALLRVKNGEL    200

BSNT_02502___    201 LTTPAYLAFMKLVFQEACSILKLENEEKAWERVQAVCGQTKENRSSMLVD    250
                     :|..||..:|:.||:||.:||.|.:.||||.:|..||..|::|.||||||
RBAM_014970__    201 VTNDAYKKYMRNVFEEAETILGLADREKAWNKVCEVCRLTEKNHSSMLVD    250

BSNT_02502___    251 VIGGRQTEADAIIGYLLKEASLQGLDAVHLEFLYGSIKALERNTNKVF    298
                     ::.||:||||||||||:|||..:||.||||.||:.||||||||     
RBAM_014970__    251 IMAGRRTEADAIIGYLVKEAESRGLPAVHLPFLHRSIKALERN-----    293


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