Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02494 and RBAM_014900

See DNA alignment / Visit BSNT_02494 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:15
# Commandline: needle
#    -asequence pep-align/BSNT_02494___ylbK.1.9828.seq
#    -bsequence pep-align/RBAM_014900___ylbK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02494___ylbK-RBAM_014900___ylbK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02494___ylbK-RBAM_014900___ylbK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02494___ylbK
# 2: RBAM_014900___ylbK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 260
# Identity:     225/260 (86.5%)
# Similarity:   250/260 (96.2%)
# Gaps:           1/260 ( 0.4%)
# Score: 1172.0
# 
#
#=======================================

BSNT_02494___      1 MAKPKIGLALGSGGARGLAHLGVLSSLHKHQIEVDMIAGSSMGALVGSFY     50
                     ||||.||||||||||||:||||||||||||||.:||||||||||||||||
RBAM_014900__      1 MAKPTIGLALGSGGARGIAHLGVLSSLHKHQIPIDMIAGSSMGALVGSFY     50

BSNT_02494___     51 AAGHDVATMKKVAKAFKRRLYADYTVPKLGFLKGDRVRQLVHAYTFGKPI    100
                     |||||||||||||||||||||||||:||||||||||:||||||||:||||
RBAM_014900__     51 AAGHDVATMKKVAKAFKRRLYADYTMPKLGFLKGDRIRQLVHAYTYGKPI    100

BSNT_02494___    101 EELQIPLGIVACDLQTGEKIVFRKGSVSDAVRASISIPGIFIPQRLDGRL    150
                     |||:|||||||||||||||:||.|||||:||||||||||:|:||:::||:
RBAM_014900__    101 EELRIPLGIVACDLQTGEKLVFTKGSVSEAVRASISIPGVFVPQKMNGRM    150

BSNT_02494___    151 LVDGAVVDRIPVSVVKDMGADIIIASDVSRVRKTETAVHIFDVIMQSMDI    200
                     |||||||||||||.||||||||:||||||||:|||.|.||||||||||||
RBAM_014900__    151 LVDGAVVDRIPVSAVKDMGADIVIASDVSRVKKTEKAAHIFDVIMQSMDI    200

BSNT_02494___    201 LQNELVRHQTIAADIMIRPSLETYSSSSFANIEEMISAGEEATNRMISKI    250
                     ||||||||||||||:|||||||::||||||||:.||:|||||.:|||.:|
RBAM_014900__    201 LQNELVRHQTIAADVMIRPSLESFSSSSFANIDHMITAGEEAADRMIGRI    250

BSNT_02494___    251 RKEIENWEGS    260
                     ::||||||| 
RBAM_014900__    251 KQEIENWEG-    259


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