Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02494 and RBAM_014900

See Amino acid alignment / Visit BSNT_02494 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:15
# Commandline: needle
#    -asequence dna-align/BSNT_02494___ylbK.1.9828.seq
#    -bsequence dna-align/RBAM_014900___ylbK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02494___ylbK-RBAM_014900___ylbK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02494___ylbK-RBAM_014900___ylbK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02494___ylbK
# 2: RBAM_014900___ylbK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 784
# Identity:     621/784 (79.2%)
# Similarity:   621/784 (79.2%)
# Gaps:           5/784 ( 0.6%)
# Score: 2453.0
# 
#
#=======================================

BSNT_02494___      1 TTGGCCAAACCTAAAATCGGGTTAGCGTTAGGATCGGGAGGGGCCAGAGG     50
                     |||||||||||||.||||||||||||||||||.|||||||||||.|||||
RBAM_014900__      1 TTGGCCAAACCTACAATCGGGTTAGCGTTAGGTTCGGGAGGGGCAAGAGG     50

BSNT_02494___     51 GCTCGCTCATCTCGGTGTGCTTTCCAGTTTACATAAGCACCAAATTGAAG    100
                     ..|||||||||||||.|||.|.|||||||||||||||||.||.|||..|.
RBAM_014900__     51 CATCGCTCATCTCGGAGTGTTATCCAGTTTACATAAGCATCAGATTCCAA    100

BSNT_02494___    101 TGGATATGATTGCAGGAAGCAGCATGGGCGCTTTGGTGGGCAGTTTTTAC    150
                     |.|||||||||||.||.|||||||||||.||.||.||.||.||.|||||.
RBAM_014900__    101 TTGATATGATTGCCGGCAGCAGCATGGGAGCATTAGTCGGAAGCTTTTAT    150

BSNT_02494___    151 GCCGCCGGACATGACGTGGCAACGATGAAAAAAGTAGCCAAAGCCTTTAA    200
                     ||.|||||.|||||||||||.||||||||||||||.||||||||.|||||
RBAM_014900__    151 GCGGCCGGGCATGACGTGGCCACGATGAAAAAAGTCGCCAAAGCATTTAA    200

BSNT_02494___    201 ACGAAGGCTTTATGCTGATTATACGGTTCCGAAACTCGGTTTTTTAAAAG    250
                     .||..||||.||.||.|||||||||.|.|||||.|||||.||||||||||
RBAM_014900__    201 GCGGCGGCTGTACGCGGATTATACGATGCCGAAGCTCGGATTTTTAAAAG    250

BSNT_02494___    251 GTGACCGCGTCAGACAGCTTGTGCATGCTTATACATTCGGAAAACCGATT    300
                     |.||||||.||||.|||||.||.|||||.|||||.|.|||.||.|||||.
RBAM_014900__    251 GAGACCGCATCAGGCAGCTCGTTCATGCCTATACGTACGGCAAGCCGATA    300

BSNT_02494___    301 GAAGAGCTCCAAATCCCGCTGGGCATTGTTGCGTGTGATCTACAGACGGG    350
                     |||||.||.|..||||||||.|||||.||.||.||.||.||.|||||.||
RBAM_014900__    301 GAAGAACTGCGGATCCCGCTCGGCATCGTGGCCTGCGACCTTCAGACCGG    350

BSNT_02494___    351 AGAAAAGATTG-TGTTCCGAAAAGGATCAGTGTCAGATGCAGTGAGGGCC    399
                     .|||||..|.| |.||.|| |||||.||||||||.||.||.||..|.||.
RBAM_014900__    351 CGAAAAACTCGTTTTTACG-AAAGGTTCAGTGTCCGAAGCCGTCCGCGCG    399

BSNT_02494___    400 AGCATCAGCATCCCGGGTATCTTTATTCCGCAGCGGCTGGACGGACGCCT    449
                     |||||||||||.|||||..|.||..|.|||||.....||.|||||||..|
RBAM_014900__    400 AGCATCAGCATACCGGGCGTTTTCGTCCCGCAAAAAATGAACGGACGTAT    449

BSNT_02494___    450 TCTTGTAGACGGCGCGGTCGTCGATCGAATTCCGGTTTCTGTTGTGAAAG    499
                     ..|.||.|||||||||||.|||||..||||.||||||||.|..||.||||
RBAM_014900__    450 GTTAGTCGACGGCGCGGTGGTCGACAGAATCCCGGTTTCCGCCGTAAAAG    499

BSNT_02494___    500 ACATGGGAGCTGATATTATCATCGCTTCGGATGTTTCCAGGGTTCGAAAA    549
                     |.|||||.||||||||..|||||||.||.||.||.|||.||||...||||
RBAM_014900__    500 ATATGGGTGCTGATATCGTCATCGCCTCTGACGTATCCCGGGTGAAAAAA    549

BSNT_02494___    550 ACTGAAACAGCAGTGCATATTTTTGATGTGATTATGCAAAGTATGGATAT    599
                     ||.||||..||.|..||||||||||||||.||.|||||||||||||||||
RBAM_014900__    550 ACGGAAAAGGCGGCACATATTTTTGATGTAATCATGCAAAGTATGGATAT    599

BSNT_02494___    600 ACTGCAAAATGAATTAGTGCGGCATCAAACAATTGCCGCAGATATCATGA    649
                     |||||||||||||||.||.||.||.||.||.|||||||||||..||||||
RBAM_014900__    600 ACTGCAAAATGAATTGGTCCGTCACCAGACCATTGCCGCAGACGTCATGA    649

BSNT_02494___    650 TTCGCCCTTCCCTTGAAACTTACAGCTCAAGCTCGTTTGCCAATATTGAA    699
                     |.||||||||.||||||.|.|.|||||||||.||.||||||||.|||||.
RBAM_014900__    650 TCCGCCCTTCTCTTGAATCATTCAGCTCAAGTTCTTTTGCCAACATTGAT    699

BSNT_02494___    700 GAAATGATATCGGCAGGCGAAGAGGCGACAAACCGAATGATCAGCAAGAT    749
                     .|.|||||..|.||.||||||||.||..||.||||.||||||.||..|||
RBAM_014900__    700 CATATGATCACAGCGGGCGAAGAAGCCGCAGACCGGATGATCGGCCGGAT    749

BSNT_02494___    750 AAGAAAAGAAATAGAGAATTGGGAGGGCTCATAA    783
                     .|.|.|||||||||||||.||||||||||.|   
RBAM_014900__    750 TAAACAAGAAATAGAGAACTGGGAGGGCTAA---    780


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