Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02484 and RBAM_014830

See DNA alignment / Visit BSNT_02484 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:14
# Commandline: needle
#    -asequence pep-align/BSNT_02484___ylbD.1.9828.seq
#    -bsequence pep-align/RBAM_014830___ylbD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02484___ylbD-RBAM_014830___ylbD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02484___ylbD-RBAM_014830___ylbD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02484___ylbD
# 2: RBAM_014830___ylbD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 136
# Identity:      99/136 (72.8%)
# Similarity:   112/136 (82.4%)
# Gaps:           4/136 ( 2.9%)
# Score: 519.5
# 
#
#=======================================

BSNT_02484___      1 MANQHANHSINDFKQFVKKHPKLIKEVRKEQRSWQDVYENWVLFGESDPI     50
                     ||||.:..||:|||||||||||||:.|||||||||:|||||||.||.|||
RBAM_014830__      1 MANQQSRQSIDDFKQFVKKHPKLIQNVRKEQRSWQEVYENWVLLGEDDPI     50

BSNT_02484___     51 WDPYR----EPEEASEAVPETPQKNDFVSKMVTAVKKMDVNQMNEQINKM     96
                     |:|::    :|...:|...|..:||||||||||||||||:||||||||||
RBAM_014830__     51 WNPFKDEAVQPSSDAETKKEPAEKNDFVSKMVTAVKKMDINQMNEQINKM    100

BSNT_02484___     97 SQSISSLQSLLNTFSGSGQKHSQPGSGQHPFSFRKD    132
                     |||||||||||:.||||..|..:.||||||||||||
RBAM_014830__    101 SQSISSLQSLLSQFSGSSTKQPRQGSGQHPFSFRKD    136


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