Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02483 and RBAM_014820
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:14
# Commandline: needle
# -asequence pep-align/BSNT_02483___ylbC.1.9828.seq
# -bsequence pep-align/RBAM_014820___ylbC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02483___ylbC-RBAM_014820___ylbC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02483___ylbC-RBAM_014820___ylbC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02483___ylbC
# 2: RBAM_014820___ylbC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 347
# Identity: 270/347 (77.8%)
# Similarity: 312/347 (89.9%)
# Gaps: 2/347 ( 0.6%)
# Score: 1464.0
#
#
#=======================================
BSNT_02483___ 1 MKNILRAMVILLIICGTYVLFIQYGSVPEKKSNDSEPQVSNEEAQSGKRI 50
||||.||:||||:|.|.|||||||||.|:||::..|||||||| :||||:
RBAM_014820__ 1 MKNIARALVILLLIYGAYVLFIQYGSAPQKKTDQEEPQVSNEE-ESGKRL 49
BSNT_02483___ 51 HMPTSGLLSFMGKPADEVTKKLGEPERIDPSAYDYDWWVYNQGKDQYIQI 100
.||:|||||.|||.|.:|.||||||.|.|||||||:|||||||||||:|:
RBAM_014820__ 50 KMPSSGLLSLMGKSAADVKKKLGEPSRKDPSAYDYEWWVYNQGKDQYVQV 99
BSNT_02483___ 101 GVLNNKVVTLFASGNDINAKPFKIGESTGEVFKTTQVAPFVNVEYKGNSY 150
|:||:|.|||:|||:.|||||||||||||||||||||:|||||..|||:|
RBAM_014820__ 100 GILNDKAVTLYASGSGINAKPFKIGESTGEVFKTTQVSPFVNVTDKGNTY 149
BSNT_02483___ 151 RFEFSEEDINTRPTVKVGKMYVQLYMDKFEGKLSSIRAFDAQTFVKQRPY 200
||||||||||||||||:|.||||||||||:|.|||||||||:|.||||||
RBAM_014820__ 150 RFEFSEEDINTRPTVKIGGMYVQLYMDKFDGNLSSIRAFDAETLVKQRPY 199
BSNT_02483___ 201 EVVYRGELIKPKAVSDEKWKKIQTTSEKQILDLTNVIRVKHGLAKLEWDQ 250
||:|||:|.:|:.|||:||..|:..||:||||:|||||||||||:|:||:
RBAM_014820__ 200 EVMYRGKLTEPEPVSDKKWNDIERASEQQILDITNVIRVKHGLARLKWDE 249
BSNT_02483___ 251 PTAEVAFGHSEDMKENNYFSHVSKKYGSLKDRLEEGHVDFQQAGENIAYN 300
..|:||||||:|||:|.||||||||||:||||||:|.|.:::||||||||
RBAM_014820__ 250 GAAKVAFGHSKDMKDNKYFSHVSKKYGTLKDRLEKGDVKYREAGENIAYN 299
BSNT_02483___ 301 YVDGPAAVEGWLNSEGHRKALLNSDYTHLGVGVDRKYYTQNFIKRW- 346
||||||||||||||||||||||:.||||||||||:|||||||||.|
RBAM_014820__ 300 YVDGPAAVEGWLNSEGHRKALLSPDYTHLGVGVDQKYYTQNFIKPWQ 346
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