Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02482 and RBAM_014810

See DNA alignment / Visit BSNT_02482 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:14
# Commandline: needle
#    -asequence pep-align/BSNT_02482___ylbB.1.9828.seq
#    -bsequence pep-align/RBAM_014810___ylbB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02482___ylbB-RBAM_014810___ylbB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02482___ylbB-RBAM_014810___ylbB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02482___ylbB
# 2: RBAM_014810___ylbB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 148
# Identity:     123/148 (83.1%)
# Similarity:   134/148 (90.5%)
# Gaps:           1/148 ( 0.7%)
# Score: 610.0
# 
#
#=======================================

BSNT_02482___      1 MTKIKDLMTADLQYCTVLDNVYEAAVKMKDANVGAIPVVDEDGETLVGIV     50
                     ||||..|||:|||||||||||||||||||||:|||||:|||||.||||||
RBAM_014810__      1 MTKINKLMTSDLQYCTVLDNVYEAAVKMKDADVGAIPIVDEDGATLVGIV     50

BSNT_02482___     51 TDRDLVLRGIAIKKPNSQKITDAMTEKPVSVEEDASVDEVLHLMASHQLR    100
                     |||||||||||.||||||||||||||:.:|.||||||:|||||||.||||
RBAM_014810__     51 TDRDLVLRGIASKKPNSQKITDAMTERVISAEEDASVEEVLHLMAEHQLR    100

BSNT_02482___    101 RIPVTKNKKLTGIVTLGDLSLSEQTNERAGSALSDISEGDNREEGFFH    148
                     |||||::|||.||||||||||:||:||:||.||||||| |...|||.|
RBAM_014810__    101 RIPVTRDKKLVGIVTLGDLSLAEQSNEQAGRALSDISE-DGGPEGFIH    147


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