Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02482 and RBAM_014810
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:14
# Commandline: needle
# -asequence dna-align/BSNT_02482___ylbB.1.9828.seq
# -bsequence dna-align/RBAM_014810___ylbB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02482___ylbB-RBAM_014810___ylbB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02482___ylbB-RBAM_014810___ylbB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02482___ylbB
# 2: RBAM_014810___ylbB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 460
# Identity: 337/460 (73.3%)
# Similarity: 337/460 (73.3%)
# Gaps: 29/460 ( 6.3%)
# Score: 1228.0
#
#
#=======================================
BSNT_02482___ 1 ATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGT 50
||||||||.||.||..|.||.|||||..|.||||||||||||||.||.||
RBAM_014810__ 1 ATGACAAAGATCAATAAGCTCATGACGTCAGACTTGCAATATTGTACAGT 50
BSNT_02482___ 51 ATTAGATAATGTATATGAAGCTGCAGTAAAGATGAAGGACGCAAATGTAG 100
||||||||||||||||||||||||.||.||||||||.||||||.||||.|
RBAM_014810__ 51 ATTAGATAATGTATATGAAGCTGCGGTGAAGATGAAAGACGCAGATGTCG 100
BSNT_02482___ 101 GAGCGATACCGGTAGTTGATGAGGACGGGGAAACATTGGTCGGCATCGTA 150
|.||.||.|||.||||.|||||.|||||.|..|||.|.|||||.|||||.
RBAM_014810__ 101 GCGCCATTCCGATAGTGGATGAAGACGGCGCCACACTTGTCGGGATCGTG 150
BSNT_02482___ 151 ACCGACCGCGATCTCGTATTAAGAGGAATCGCCATCAAAAAA-CCGAACT 199
||.|||.|.||||||||||||.|.|||||.| |.|||||||| |||||||
RBAM_014810__ 151 ACAGACAGAGATCTCGTATTACGGGGAATTG-CTTCAAAAAAGCCGAACT 199
BSNT_02482___ 200 CGCAAAAAATCACTGACGCGATGACCGAAAAACC----TGTCAGTGTGGA 245
|.||||||||.||.|||||.||||| |.|.| |.||||||..||
RBAM_014810__ 200 CTCAAAAAATAACCGACGCAATGAC----AGAGCGGGTTATCAGTGCAGA 245
BSNT_02482___ 246 GGAAGATGCTTCAGTCGATGAGGTTCTTCATTTGATGGCATCGCATCAGC 295
.|||||.||.||.||.||.|||||.||.|||||||||||....|||||||
RBAM_014810__ 246 AGAAGACGCCTCTGTGGAGGAGGTGCTCCATTTGATGGCTGAACATCAGC 295
BSNT_02482___ 296 TCAGAAGGATACCAGTTACAAAAAATAAAAAACTGACTGGAATTGTCACG 345
|||||||.||.||.||.||||...||||||||.||...||.|||||.|||
RBAM_014810__ 296 TCAGAAGAATTCCCGTCACAAGGGATAAAAAATTGGTCGGCATTGTTACG 345
BSNT_02482___ 346 CTTGGTGATCTTTCTTTATCTGAGCAAACGAATGAACGTGCCGGCAGCGC 395
||.||.||||||||.||..|.||||||.|.|||||.|..||.|||.|.||
RBAM_014810__ 346 CTCGGAGATCTTTCGTTGGCCGAGCAATCAAATGAGCAAGCAGGCCGGGC 395
BSNT_02482___ 396 CTTATCGGATATTTCCGAA------GGT--GATAATAGAGAAGAAGGTTT 437
..|.||.||.|||||.||| ||| | ||.||.||
RBAM_014810__ 396 GCTGTCTGACATTTCTGAAGACGGCGGTCCG-----------GAGGGGTT 434
BSNT_02482___ 438 TTTTCATTAA 447
|.|.||||||
RBAM_014810__ 435 TATCCATTAA 444
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