Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02481 and RBAM_014800

See DNA alignment / Visit BSNT_02481 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:14
# Commandline: needle
#    -asequence pep-align/BSNT_02481___ylbA.1.9828.seq
#    -bsequence pep-align/RBAM_014800___ylbA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02481___ylbA-RBAM_014800___ylbA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02481___ylbA-RBAM_014800___ylbA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02481___ylbA
# 2: RBAM_014800___ylbA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 120
# Identity:      89/120 (74.2%)
# Similarity:    98/120 (81.7%)
# Gaps:           1/120 ( 0.8%)
# Score: 458.0
# 
#
#=======================================

BSNT_02481___      1 MLKFTESGLEGVKAELSWLDDLMESKGLIRAGQWDYERVTYDKKFSTIEG     50
                      :||..||||||.||||.|:||||.||||.||||||||||||||||..||
RBAM_014800__      1 -MKFENSGLEGVTAELSRLNDLMEGKGLILAGQWDYERVTYDKKFSVPEG     49

BSNT_02481___     51 TFYLRIQGIAAEGDVGSGRAVIQLMSPLLGKHYYPHGVEYGETEEFPVQV    100
                     ||||||||.|.|||||..||||||.:|||||||||||||||..|:||..|
RBAM_014800__     50 TFYLRIQGTAKEGDVGGSRAVIQLKAPLLGKHYYPHGVEYGSAEKFPEYV     99

BSNT_02481___    101 VTKSKALIQDISDMLKTVQM    120
                     |.:||||:.::.:.||||||
RBAM_014800__    100 VAESKALLLELEESLKTVQM    119


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