Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02481 and RBAM_014800
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:14
# Commandline: needle
# -asequence dna-align/BSNT_02481___ylbA.1.9828.seq
# -bsequence dna-align/RBAM_014800___ylbA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02481___ylbA-RBAM_014800___ylbA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02481___ylbA-RBAM_014800___ylbA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02481___ylbA
# 2: RBAM_014800___ylbA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 382
# Identity: 276/382 (72.3%)
# Similarity: 276/382 (72.3%)
# Gaps: 41/382 (10.7%)
# Score: 930.0
#
#
#=======================================
BSNT_02481___ 1 GTGTTGAAGTTTACTGAA---AGCGGACTTGAAGGGGTTAAGGCTGAGCT 47
|||||||| |||| |||||.|||||||||||.|..||.|||||
RBAM_014800__ 1 ---TTGAAGTT---TGAAAACAGCGGTCTTGAAGGGGTAACAGCGGAGCT 44
BSNT_02481___ 48 CAGCTGGCTAG-ACGACTTAATGGAAAGCAAAGGTCTCA-TCAGAGCGGG 95
|||| .|||.| |.||..|.||||||.|.|||||.|||| ||.| ||.||
RBAM_014800__ 45 CAGC-CGCTTGAATGATCTGATGGAAGGTAAAGGGCTCATTCTG-GCTGG 92
BSNT_02481___ 96 TCAATGGGATTACGAGAGAGTCACCTATGACAAGAAGTTTTC--GACGAT 143
.|||||||||||.||.|||||.||.||.|||||.|||||||| .|| .
RBAM_014800__ 93 ACAATGGGATTATGAAAGAGTGACTTACGACAAAAAGTTTTCAGTAC--C 140
BSNT_02481___ 144 TGAGGGCACGTTTTACCTGCGGATACAAGGAATTGCGGC---AGAGGGTG 190
||||||.||.|||||.||||||||.||||||| |||| ||||||.|
RBAM_014800__ 141 TGAGGGGACATTTTATCTGCGGATTCAAGGAA---CGGCAAAAGAGGGCG 187
BSNT_02481___ 191 ATGTCGGAAGCGGACGCGCGGTGATTCAATTAATGTCCCCTCTCCTAGGC 240
|||||||..||.|.||.||.||.|||||..|.|.|.|||||||..||||.
RBAM_014800__ 188 ATGTCGGCGGCAGCCGGGCCGTAATTCAGCTGAAGGCCCCTCTTTTAGGA 237
BSNT_02481___ 241 AAGCATTATTACCCGCACGGAGTAGAGTATGG-AGAAACG--GAAGAGTT 287
|||||||||||.||||||||.|||||.||.|| || || |||.|.||
RBAM_014800__ 238 AAGCATTATTATCCGCACGGCGTAGAATACGGCAG---CGCTGAAAAATT 284
BSNT_02481___ 288 TCCCGTACAGGTTGTGACAAAAAGCAAAGC---ACTGATTCA---GGACA 331
|||.|.|.|.||.||..|..|||||||||| ||||.||.| ||| |
RBAM_014800__ 285 TCCGGAATATGTCGTCGCTGAAAGCAAAGCTTTACTGCTTGAATTGGA-A 333
BSNT_02481___ 332 TATCCGACATGTTAAAAACAGTTCAAATGTAA 363
.| |.|| |||||||||||.|||||||||
RBAM_014800__ 334 GA---GTCA--TTAAAAACAGTGCAAATGTAA 360
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