Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02479 and RBAM_014790

See DNA alignment / Visit BSNT_02479 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:14
# Commandline: needle
#    -asequence pep-align/BSNT_02479___ctaG.1.9828.seq
#    -bsequence pep-align/RBAM_014790___ctaG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02479___ctaG-RBAM_014790___ctaG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02479___ctaG-RBAM_014790___ctaG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02479___ctaG
# 2: RBAM_014790___ctaG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 300
# Identity:     214/300 (71.3%)
# Similarity:   249/300 (83.0%)
# Gaps:           6/300 ( 2.0%)
# Score: 1164.0
# 
#
#=======================================

BSNT_02479___      1 ---MNQLEIFGFRAMWSPYLFCILLGITALYLYFYRRMSSKPNRITGKEM     47
                        :..||:||||||||||||||...||.:|.|:   .|....|::.||.
RBAM_014790__      1 MRDLINLEMFGFRAMWSPYLFCITAVITGVYFYW---CSRHKGRVSAKEK     47

BSNT_02479___     48 VCFLSAMLFLYAAEGSPVDLLGHIMFSAHMVQMAVLYLVVPPLLIAGIPA     97
                     |.|:.:.||.|||.|||||||||:||||||.|||||:||||||||:|||.
RBAM_014790__     48 VLFVLSALFFYAAAGSPVDLLGHVMFSAHMTQMAVLFLVVPPLLISGIPG     97

BSNT_02479___     98 WLWEKIIFRPSIKPVFSFFTTPLIALLLFNGIFSLYHVPLIFDTVKTDSF    147
                     |.|:|:||||.:||:||||:.|||||:||||||||||:|.|||.|||.|.
RBAM_014790__     98 WAWKKLIFRPVVKPLFSFFSMPLIALVLFNGIFSLYHIPFIFDFVKTASL    147

BSNT_02479___    148 YHTFITWLIFVLAFFMWWPLVHKVGRLRQLSGLMKLGYIMADGMLLTPAC    197
                     |||.:..||||.||||||||||||..|.:||||||||||||||:||||||
RBAM_014790__    148 YHTLMNGLIFVTAFFMWWPLVHKVDGLPRLSGLMKLGYIMADGILLTPAC    197

BSNT_02479___    198 ALIMFSGAPLYATYTDPSAWAEAMRLCVPADMMGQVPLTGPEMLNTLPLL    247
                     |||||||||:|||||||:||||||:||||.|::.::||:||||.||||.|
RBAM_014790__    198 ALIMFSGAPMYATYTDPAAWAEAMKLCVPLDLLEEIPLSGPEMFNTLPPL    247

BSNT_02479___    248 EDQQLGAVMMKIIQEIVYGTFLAIIFFQWVKKEREKDGQEEPPYIQQTIS    297
                     ||||||||:||||||.||||:||:||||||:.|||||...|||||:.|:|
RBAM_014790__    248 EDQQLGAVLMKIIQEAVYGTYLAVIFFQWVRTEREKDTMSEPPYIEHTVS    297


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