Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02479 and RBAM_014790
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:14
# Commandline: needle
# -asequence dna-align/BSNT_02479___ctaG.1.9828.seq
# -bsequence dna-align/RBAM_014790___ctaG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02479___ctaG-RBAM_014790___ctaG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02479___ctaG-RBAM_014790___ctaG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02479___ctaG
# 2: RBAM_014790___ctaG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 937
# Identity: 645/937 (68.8%)
# Similarity: 645/937 (68.8%)
# Gaps: 86/937 ( 9.2%)
# Score: 2212.0
#
#
#=======================================
BSNT_02479___ 1 ------------ATGAATCAGTTGGAGATATTCGGGTTTCGCGCGATGTG 38
||.||| |||||.||.||||||||||||||.|||||
RBAM_014790__ 1 GTGAGAGATTTGATTAAT---TTGGAAATGTTCGGGTTTCGCGCAATGTG 47
BSNT_02479___ 39 GAGCCCTTATCTTTTTTGTAT------CCTGTTAGGCATTAC-GGCGCTT 81
||||||.|||||.|||||||| |.|| ||.|| ||
RBAM_014790__ 48 GAGCCCGTATCTGTTTTGTATAACTGCCGTG------ATAACAGG----- 86
BSNT_02479___ 82 TATCTCTATTTTTACAGGCGAATGTCTTCAAAGCCGAATCGAATAA---- 127
|.|.||.||||||.||.| .||||| |.||||
RBAM_014790__ 87 --TGTTTACTTTTACTGGTG----------CAGCCG----GCATAAAGGA 120
BSNT_02479___ 128 -------CTGGTAAAGAGATGG-------TGTGCTTTCTGTCGGCGATGC 163
|.|.|||.||||.|| |||||||||.| .||
RBAM_014790__ 121 CGTGTGTCCGCTAAGGAGAAGGTGCTGTTTGTGCTTTCCG-------CGC 163
BSNT_02479___ 164 TGTTTTTATATGCAGCCGAGGGAAGCCCGGTTGACCTGCTCGGACATATT 213
|.|||||.||.||.||.|.||||||.||||||||..|..|.||.|||.|.
RBAM_014790__ 164 TATTTTTTTACGCGGCTGCGGGAAGTCCGGTTGATTTATTGGGCCATGTG 213
BSNT_02479___ 214 ATGTTCAGCGCACATATGGTGCAGATGGCCGTCCTGTATTTGGTTGTCCC 263
|||||||||||.||||||..|||||||||.||.||||.|||.||.||.||
RBAM_014790__ 214 ATGTTCAGCGCCCATATGACGCAGATGGCGGTTCTGTTTTTAGTCGTACC 263
BSNT_02479___ 264 TCCACTGTTAATCGCGGGAATTCCTGCATGGCTCTGGGAAAAAATTATTT 313
.||.|||||.||..|.||||||||.|..|||...|||.|||||.|.||.|
RBAM_014790__ 264 GCCGCTGTTGATTTCCGGAATTCCCGGCTGGGCATGGAAAAAACTGATCT 313
BSNT_02479___ 314 TCAGGCCT-TCAATCAAACCGGTTTTTTCCTTTTTTACAACGCCTTTAAT 362
||.|.||| || .|.||.|||.|.|||||.||.|||.|||.|||..|.||
RBAM_014790__ 314 TCCGTCCTGTC-GTAAAGCCGCTGTTTTCGTTCTTTTCAATGCCGCTTAT 362
BSNT_02479___ 363 TGCTTTGCTTTTGTTTAACGGCATTTTTTCTTTATATCATGTACCGCTTA 412
.||.||..|..||||||||||.||||||||..|.|||||..|.|||.|||
RBAM_014790__ 363 CGCATTAGTGCTGTTTAACGGTATTTTTTCACTGTATCACATCCCGTTTA 412
BSNT_02479___ 413 TATTTGATACTGTCAAAACCGATTCGTTTTACCATACATTCATCACTTGG 462
||||||||...||||||||.|.||||.|.||.||.||..|.||.|...|.
RBAM_014790__ 413 TATTTGATTTCGTCAAAACGGCTTCGCTGTATCACACGCTGATGAACGGA 462
BSNT_02479___ 463 CTTATCTTTGTGCTTGCATTCTTCATGTGGTGGCCGCTTGTTCATAAGGT 512
||.||||||||....||.||.||.|||||||||||||||||.||||||||
RBAM_014790__ 463 CTCATCTTTGTAACGGCGTTTTTTATGTGGTGGCCGCTTGTGCATAAGGT 512
BSNT_02479___ 513 GGGGCGTCTACGGCAGCTCAGCGGCTTGATGAAGCTGGGGTATATTATGG 562
||...||||.|..|..||||||||.||.||||||||||||||||||||||
RBAM_014790__ 513 GGACGGTCTGCCCCGTCTCAGCGGTTTAATGAAGCTGGGGTATATTATGG 562
BSNT_02479___ 563 CGGACGGTATGCTGCTCACACCTGCTTGCGCCTTAATCATGTTCAGCGGT 612
|.|||||.||..||.|.||.||.||.|||||..|.||.|||||||||||.
RBAM_014790__ 563 CAGACGGGATTTTGTTAACGCCGGCCTGCGCGCTCATTATGTTCAGCGGG 612
BSNT_02479___ 613 GCGCCGTTATACGCCACCTATACAGATCCGTCTGCATGGGCCGAGGCAAT 662
|||||..|.||.|||||.||||||||||||.|.||.||||||||.|||||
RBAM_014790__ 613 GCGCCCATGTATGCCACGTATACAGATCCGGCGGCTTGGGCCGAAGCAAT 662
BSNT_02479___ 663 GCGCCTTTGCGTGCCAGCGGATATGATGGGGCAGGTCCCATTAACAGGAC 712
|...||||||||.||....|||.||.|||.|.||.||||.|||.|.||||
RBAM_014790__ 663 GAAGCTTTGCGTTCCTTTAGATTTGCTGGAGGAGATCCCTTTATCCGGAC 712
BSNT_02479___ 713 CGGAGATGTTGAATACACTGCCTTTGTTAGAGGATCAGCAGCTCGGGGCC 762
||||||||||.||.||.||.|||....|.||.|||||||||||.|||||.
RBAM_014790__ 713 CGGAGATGTTTAACACGCTCCCTCCTCTGGAAGATCAGCAGCTTGGGGCA 762
BSNT_02479___ 763 GTCATGATGAAAATCATTCAGGAAATTGTGTACGGTACTTTTTTGGCGAT 812
||..||||||||||||||||.||....||.|||||.||.|.||||||..|
RBAM_014790__ 763 GTGCTGATGAAAATCATTCAAGAGGCGGTCTACGGAACATATTTGGCTGT 812
BSNT_02479___ 813 TATTTTTTTCCAATGGGTGAAGAA-AGAAAGGGAAAAGGACGGGCAGGA- 860
.||.|||||.||.||||| .|||| .|||.|||||||.|| .|.||
RBAM_014790__ 813 CATCTTTTTTCAGTGGGT-CAGAACGGAACGGGAAAAAGA----TACGAT 857
BSNT_02479___ 861 ---AGAGCCGCCGTATATTCAGCAGACGATATCATAA 894
|||||||||||||||..||||.||..|.||||.|
RBAM_014790__ 858 GTCAGAGCCGCCGTATATCGAGCATACCGTCTCATGA 894
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