Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02478 and RBAM_014780

See DNA alignment / Visit BSNT_02478 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:14
# Commandline: needle
#    -asequence pep-align/BSNT_02478___ctaF.1.9828.seq
#    -bsequence pep-align/RBAM_014780___ctaF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02478___ctaF-RBAM_014780___ctaF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02478___ctaF-RBAM_014780___ctaF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02478___ctaF
# 2: RBAM_014780___ctaF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 110
# Identity:      85/110 (77.3%)
# Similarity:   101/110 (91.8%)
# Gaps:           0/110 ( 0.0%)
# Score: 471.0
# 
#
#=======================================

BSNT_02478___      1 MVDKKSRGHINSDLEFKKKKHTREMKYQVLSFGLMIGLTIVAFLTVATDG     50
                     |.|.|:||.:::|||::|||:..||||||:|||||||||:|||||||.||
RBAM_014780__      1 MDDNKNRGTVSTDLEYRKKKNAEEMKYQVISFGLMIGLTLVAFLTVAADG     50

BSNT_02478___     51 VGSWFTIPFIILLAAIQVIFQLYYFMHMNQKGHEAPALFLYSGVFVAFIT    100
                     :..|||:||:||||.|||||||:|||||:|||||||:||||||:||||||
RBAM_014780__     51 IAGWFTMPFLILLAVIQVIFQLFYFMHMSQKGHEAPSLFLYSGIFVAFIT    100

BSNT_02478___    101 VLAFVTIIWW    110
                     ||||||||||
RBAM_014780__    101 VLAFVTIIWW    110


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