Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02478 and RBAM_014780

See Amino acid alignment / Visit BSNT_02478 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:14
# Commandline: needle
#    -asequence dna-align/BSNT_02478___ctaF.1.9828.seq
#    -bsequence dna-align/RBAM_014780___ctaF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02478___ctaF-RBAM_014780___ctaF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02478___ctaF-RBAM_014780___ctaF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02478___ctaF
# 2: RBAM_014780___ctaF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 337
# Identity:     263/337 (78.0%)
# Similarity:   263/337 (78.0%)
# Gaps:           8/337 ( 2.4%)
# Score: 990.0
# 
#
#=======================================

BSNT_02478___      1 ATGGTCGATAAAAAAAGCAGAGGGCATATCAATAGCGACCTTGAATTT--     48
                     ||||.||||||.||||.|||||||..|.|||.||..||.||.||||.|  
RBAM_014780__      1 ATGGACGATAACAAAAACAGAGGGACTGTCAGTACGGATCTCGAATATCG     50

BSNT_02478___     49 AAGAAAAAAAAGCATACCCGA-GAGATGAAATATCAAGTCCTGTCTTTTG     97
                     ||.|||.||||  || .|||| ||||||||||||||.|||.|.||.||.|
RBAM_014780__     51 AAAAAAGAAAA--AT-GCCGAGGAGATGAAATATCAGGTCATATCCTTCG     97

BSNT_02478___     98 GTTTAATGATCGGTCTTACGATTGTTGCATTTCTGACTGTGGCCACGGAC    147
                     ||||.||||||||.||||||.||||.||.|||.||||.|||||..|.|||
RBAM_014780__     98 GTTTGATGATCGGCCTTACGCTTGTCGCGTTTTTGACGGTGGCTGCTGAC    147

BSNT_02478___    148 GGTGTCGGCAGCTGGTTTACGATTCC-TTTCATTATTTTGCTAGCTGCAA    196
                     ||..|.|.|.|.|||||||||||.|| |||| |.||..||||.||.|..|
RBAM_014780__    148 GGCATTGCCGGATGGTTTACGATGCCGTTTC-TGATCCTGCTTGCGGTCA    196

BSNT_02478___    197 TTCAAGTCATCTTTCAGCTGTATTATTTCATGCATATGAATCAGAAAGGG    246
                     |.||.||||||||||||||||.|||.||.||||||||||..|||||.|||
RBAM_014780__    197 TCCAGGTCATCTTTCAGCTGTTTTACTTTATGCATATGAGCCAGAAGGGG    246

BSNT_02478___    247 CATGAGGCGCCGGCACTGTTTTTGTATTCAGGGGTGTTTGTCGCGTTTAT    296
                     |||||.||||||.||.|.|||.|||||||.||..|.||||||||||||||
RBAM_014780__    247 CATGAAGCGCCGTCATTATTTCTGTATTCGGGAATATTTGTCGCGTTTAT    296

BSNT_02478___    297 CACTGTGCTTGCGTTTGTGACAATTATATGGTGGTAA    333
                     |||.||||||||.|||||.||.|||||.|||||||||
RBAM_014780__    297 CACCGTGCTTGCATTTGTCACGATTATTTGGTGGTAA    333


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