Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02468 and RBAM_014710
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:12
# Commandline: needle
# -asequence pep-align/BSNT_02468.1.9828.seq
# -bsequence pep-align/RBAM_014710___ftsW.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02468-RBAM_014710___ftsW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02468-RBAM_014710___ftsW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02468
# 2: RBAM_014710___ftsW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 403
# Identity: 281/403 (69.7%)
# Similarity: 320/403 (79.4%)
# Gaps: 48/403 (11.9%)
# Score: 1461.0
#
#
#=======================================
BSNT_02468 1 ------------------------------------------------MR 2
.|
RBAM_014710__ 1 MFKRMLKSYDYSLICAIILLCSFGLVMVYSSSMITAVMRYGVSSDYFFKR 50
BSNT_02468 3 QLFALIAGGALFILMALFPYKALAHQKFQKGILLVSVLALISLFVFGHVA 52
||||:|||..|||:.|:||||..||||.||.|||.||.||.:||||||||
RBAM_014710__ 51 QLFAVIAGFVLFIIAAVFPYKVFAHQKIQKFILLASVAALCALFVFGHVA 100
BSNT_02468 53 GNAQSWFKIGGMSIQPGEFVKLVVILYLAAVYAKKQSYIDHLLTGVAPPV 102
||||||||||||:|||||||||.:||||||||||||||||.|||||||||
RBAM_014710__ 101 GNAQSWFKIGGMAIQPGEFVKLTLILYLAAVYAKKQSYIDQLLTGVAPPV 150
BSNT_02468 103 VMTLIICGLIAMQPDFGTAMIIGLIATCMILCSGFSGKTLVRLLLLGGIV 152
::|::||.|||:||||||||||||||.|:|:||||||:||:||:|:.|||
RBAM_014710__ 151 IVTVVICALIAIQPDFGTAMIIGLIAFCVIMCSGFSGRTLLRLVLMAGIV 200
BSNT_02468 153 FILVSPILYLNQDQILTKGRLARFESLEDPFKYANSSGLQVVNSYYAISS 202
.:|||||:||..|.|||.||::||||||:|||||::||||::||||||.|
RBAM_014710__ 201 LLLVSPIIYLKWDDILTPGRMSRFESLENPFKYASTSGLQIINSYYAIGS 250
BSNT_02468 203 GGIFGLGLGESIQKYGYLPESHTDFIMAVIAEELGIFGVLFVIFLLGFVV 252
||.|||||||.|||||||||||||||||||:||||||||||||.||.|||
RBAM_014710__ 251 GGFFGLGLGEGIQKYGYLPESHTDFIMAVISEELGIFGVLFVIVLLAFVV 300
BSNT_02468 253 IKGFYIARKCEDPFGSLLAIGISSMIAVQSFINLGGVSGLIPITGVTLPF 302
:||||||||||||||||||||||||||:|:||||||||||||||||.|||
RBAM_014710__ 301 LKGFYIARKCEDPFGSLLAIGISSMIAIQTFINLGGVSGLIPITGVPLPF 350
BSNT_02468 303 ISYGGSSLVLLLASMGILANISMFVKYSENKKKREPLAPKGMKKKQLKKT 352
|||||||::|||.|.|||.|:||.|||||.||||||:..||:|::|.:|:
RBAM_014710__ 351 ISYGGSSMLLLLMSAGILVNVSMHVKYSEKKKKREPVPSKGVKRRQTEKS 400
BSNT_02468 353 VYL 355
|||
RBAM_014710__ 401 VYL 403
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