Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02468 and RBAM_014710
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:12
# Commandline: needle
# -asequence dna-align/BSNT_02468.1.9828.seq
# -bsequence dna-align/RBAM_014710___ftsW.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02468-RBAM_014710___ftsW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02468-RBAM_014710___ftsW.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02468
# 2: RBAM_014710___ftsW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1236
# Identity: 819/1236 (66.3%)
# Similarity: 819/1236 (66.3%)
# Gaps: 192/1236 (15.5%)
# Score: 2943.0
#
#
#=======================================
BSNT_02468 0 -------------------------------------------------- 0
RBAM_014710__ 1 ATGTTTAAAAGAATGTTAAAATCTTACGATTATTCATTGATATGCGCTAT 50
BSNT_02468 0 -------------------------------------------------- 0
RBAM_014710__ 51 CATTCTGCTGTGCAGTTTCGGATTGGTAATGGTATACAGCTCAAGTATGA 100
BSNT_02468 1 --------------------------------------------ATGCGG 6
|..|||
RBAM_014710__ 101 TCACCGCCGTTATGCGTTACGGCGTGAGCAGCGACTATTTCTTTAAACGG 150
BSNT_02468 7 CAGCTGTTTGCTTTAATTGCGGG--TGGCGCTCTATTTATTCTCAT---- 50
||||||||.||..|.||.||||| |.|.|||.| ||.||||
RBAM_014710__ 151 CAGCTGTTCGCCGTCATCGCGGGGTTTGTGCTGT-----TTATCATCGCG 195
BSNT_02468 51 GGCGTTGTTTCCTTATAAAGCACTGGCCCATCAAAAGTTTCAGAAGGGGA 100
|.|||| |||||.||.||||...|.||||||||||||.|||||||....|
RBAM_014710__ 196 GCCGTT-TTTCCGTACAAAGTGTTCGCCCATCAAAAGATTCAGAAATTCA 244
BSNT_02468 101 TACTGCTTGTATCTGT-TCTCGCGCTTATCTCACTGTTTGTTTTCGGGCA 149
|||||||||..||.|| .|| ||||||..|.|.||||||||||||||.||
RBAM_014710__ 245 TACTGCTTGCGTCAGTGGCT-GCGCTTTGCGCGCTGTTTGTTTTCGGACA 293
BSNT_02468 150 TGTTGCCGGAAACGCGCAGAGCTGGTTTAAAATCGGCGGAATGAGTATTC 199
||||||||||||||||||.||||||||||||||||||||||||...||||
RBAM_014710__ 294 TGTTGCCGGAAACGCGCAAAGCTGGTTTAAAATCGGCGGAATGGCCATTC 343
BSNT_02468 200 AGCCGGGGGAGTTTGTGAAACTG-GTCGTGATTTTATACCTTGCAGCCGT 248
||||||||||.|||||.||.||| .|| ||||..|.||||||||.||.||
RBAM_014710__ 344 AGCCGGGGGAATTTGTCAAGCTGACTC-TGATACTGTACCTTGCCGCGGT 392
BSNT_02468 249 ATATGCAAAAAAACAAAGTTATATCGACCATCTGTTAACGGGAGTAGCCC 298
|||.|||||.||||||||.||||||||.||.||.||.|||||.||.||.|
RBAM_014710__ 393 ATACGCAAAGAAACAAAGCTATATCGATCAGCTTTTGACGGGGGTTGCAC 442
BSNT_02468 299 CTCCGGTAGTCATGACGCTTA-TAATTTGCGGGTTAATTGCCATGCAGCC 347
|.|||||..||.|.|| |.|| |.|||||.|.|.|.||.|||||.|||||
RBAM_014710__ 443 CGCCGGTGATCGTCAC-CGTAGTCATTTGTGCGCTTATCGCCATTCAGCC 491
BSNT_02468 348 AGATTTCGGTACAGCCATGATTATAGGGTTAATTGCGACGTGCATGATCT 397
.||.|||||.||.||.||||||||.||..|.||.|||...|||.|.||..
RBAM_014710__ 492 CGACTTCGGAACGGCGATGATTATCGGTCTGATCGCGTTTTGCGTCATTA 541
BSNT_02468 398 TGTGCTCCGGCTTCAGCGGAAAGACGCTGGTGAGGCTGCTTTTGCTC--G 445
||||.||.||.||||||||||.|||.|||.|.|||||| .||||| |
RBAM_014710__ 542 TGTGTTCGGGATTCAGCGGAAGGACCCTGCTCAGGCTG---GTGCTCATG 588
BSNT_02468 446 GC-GGAATTGTTTTCATTTTAGTCAGCCCGATCCTCTAT-TTAAATCAGG 493
|| |||||.||.||..|..|.||||||||||||.||||| |.|||| .||
RBAM_014710__ 589 GCGGGAATCGTATTGCTCCTTGTCAGCCCGATCATCTATCTGAAAT-GGG 637
BSNT_02468 494 ATCAAATTTTAACTAAAGGCCGTTTG-GCGCGTTTTGAGAGTCTTGAAGA 542
|..|.|||||.||....||.|||.|| || ||.|||||.||.||||||.|
RBAM_014710__ 638 ACGATATTTTGACACCCGGGCGTATGAGC-CGGTTTGAAAGCCTTGAAAA 686
BSNT_02468 543 CCCATTTAAGTATGCAAATTCATCAGGTTTGCAAGTGGTCAATTCTTATT 592
.||||||||.||.||.|...|||||||..||||..|..|.|||||.||||
RBAM_014710__ 687 TCCATTTAAATACGCCAGCACATCAGGCCTGCAGATTATAAATTCGTATT 736
BSNT_02468 593 ATGCGATCAGCTCAGGCGGCATTTTCGGCCTGGGGCTCGGTGAAAGTATC 642
||||||||.|||||||.||..|||||||.||.||.||.||.|||.|.||.
RBAM_014710__ 737 ATGCGATCGGCTCAGGAGGTTTTTTCGGTCTCGGTCTTGGAGAAGGCATT 786
BSNT_02468 643 CAAAAATACGGATATCTGCCTGAATCACACACTGACTTTATTATGGCTGT 692
|||||||||||.||||||||||||||.||.||.||||||||||||||.||
RBAM_014710__ 787 CAAAAATACGGTTATCTGCCTGAATCGCATACAGACTTTATTATGGCGGT 836
BSNT_02468 693 CATTGCTGAAGAGCTCGGCATTTTTGGGGTATTGTTTGTGATTTTCTTAT 742
.|||.|.||.||||||||||||||.||.||..|||||||.|||.|..|..
RBAM_014710__ 837 TATTTCAGAGGAGCTCGGCATTTTCGGCGTGCTGTTTGTCATTGTGCTGC 886
BSNT_02468 743 TGGGTTTTGTCGTCATAAAAGGTTTTTATATTGCCAGAAAATGCGAGGAC 792
|||.|||||||||..|||||||||||||||||||.||||||||.||.||.
RBAM_014710__ 887 TGGCTTTTGTCGTGTTAAAAGGTTTTTATATTGCGAGAAAATGTGAAGAT 936
BSNT_02468 793 CCGTTTGGAAGTCTTCTGGCGATCGGCATTTCAAGCATGATTGCCGTCCA 842
|||||.||.||.|||.||||.|||||.||.||.|||||||||||..|.||
RBAM_014710__ 937 CCGTTCGGGAGCCTTTTGGCAATCGGGATATCCAGCATGATTGCGATACA 986
BSNT_02468 843 GTCGTTTATTAACCTTGGCGGTGTCAGCGGATTAATTCCGATTACAGGGG 892
|.|.|||||.||.||.||||||||||||||.|||||||||||.|||||.|
RBAM_014710__ 987 GACCTTTATCAATCTCGGCGGTGTCAGCGGTTTAATTCCGATCACAGGTG 1036
BSNT_02468 893 TTACGCTGCCATTTATCAGTTATGGGGGCTCTTCTTTAGTGCTGCTGCTG 942
||.|||||||.||||||||.||.||||||||.|| |.||.||.||.|
RBAM_014710__ 1037 TTCCGCTGCCGTTTATCAGCTACGGGGGCTCATC---AATGTTGTTGTT- 1082
BSNT_02468 943 GCAAGT-ATG------GGGATATTAGCGAATATCAGCATGTTTGTGAAAT 985
|.| ||| ||.|||||.|.||||.||||||||..|||.||.|
RBAM_014710__ 1083 ---ATTAATGAGCGCCGGTATATTGGTGAATGTCAGCATGCATGTCAAGT 1129
BSNT_02468 986 ATTCAGAGAATAAGAAAAAGAGAGAGCCTTTGGCGCCGAAGGGAATGAAA 1035
|.|||||.||.|||||||||||.|||||..|..||.|.|||||..| |||
RBAM_014710__ 1130 ACTCAGAAAAGAAGAAAAAGAGGGAGCCCGTTCCGTCTAAGGGGGT-AAA 1178
BSNT_02468 1036 AAGAAACAGCTCA---AAAAAACTGTTTATCTGTAA 1068
||| ||.||..| |||||.||||.|||||.|||
RBAM_014710__ 1179 AAG--ACGGCAGACGGAAAAATCTGTGTATCTCTAA 1212
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