Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02464 and RBAM_014680

See DNA alignment / Visit BSNT_02464 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:12
# Commandline: needle
#    -asequence pep-align/BSNT_02464___ylaL.1.9828.seq
#    -bsequence pep-align/RBAM_014680___ylaL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02464___ylaL-RBAM_014680___ylaL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02464___ylaL-RBAM_014680___ylaL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02464___ylaL
# 2: RBAM_014680___ylaL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 163
# Identity:     100/163 (61.3%)
# Similarity:   127/163 (77.9%)
# Gaps:           7/163 ( 4.3%)
# Score: 518.0
# 
#
#=======================================

BSNT_02464___      1 MSVIQVKGNVTYPITIDPSVWIFDDRKFSFDRKGDSQDTYLQSAGD--ES     48
                     ||||||||||||||||||||||||||||.|::   :|..:...:.:  |.
RBAM_014680__      1 MSVIQVKGNVTYPITIDPSVWIFDDRKFPFEK---NQPVHPDGSAETQEH     47

BSNT_02464___     49 DLDPERVIREGRIAPPTLKTEKQYEKQKLMNGSFAMRLGTVLKNAEPNSS     98
                     .||||||||||||:|||||:||:|||::||||||||:||.||.||||..|
RBAM_014680__     48 TLDPERVIREGRISPPTLKSEKRYEKERLMNGSFAMKLGAVLANAEPKES     97

BSNT_02464___     99 ATQCVFVTSSGKAAVSLETALNSIVHFSEAGKPIQEGGPVHIYFEDPVHH    148
                     |..|.|::.|.:..|:||.|:::|.|||:||||:|:|||||.|.:.  ..
RBAM_014680__     98 AVLCAFISKSERTEVALEKAMDAIAHFSDAGKPLQDGGPVHFYVDG--DF    145

BSNT_02464___    149 KQPITDVKEIEII    161
                     ::|||.|.|||::
RBAM_014680__    146 EKPITGVTEIEVL    158


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