Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02462 and RBAM_014660
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:12
# Commandline: needle
# -asequence pep-align/BSNT_02462___ylaJ.1.9828.seq
# -bsequence pep-align/RBAM_014660___ylaJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02462___ylaJ-RBAM_014660___ylaJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02462___ylaJ-RBAM_014660___ylaJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02462___ylaJ
# 2: RBAM_014660___ylaJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 209
# Identity: 136/209 (65.1%)
# Similarity: 162/209 (77.5%)
# Gaps: 2/209 ( 1.0%)
# Score: 702.0
#
#
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BSNT_02462___ 1 MRILFIIVQLTLILSACAYQQGKQGQNVEKESTRQQETKPIHVKDTTQET 50
|||||||:|...||:.|...|..:|:|::.||..|::.||||||:|..||
RBAM_014660__ 1 MRILFIIIQALFILTGCTAVQDGRGRNIQNESADQRDAKPIHVKNTAPET 50
BSNT_02462___ 51 KDNGTRTDIAKHLVSVAEKNPDVKDATAVVLGGYAVVGIDVDDTLDRSKV 100
.:|..|||||||||.|.||.|.:.||||||||.|:||||||||.|:||||
RBAM_014660__ 51 AENPGRTDIAKHLVEVTEKIPGISDATAVVLGRYSVVGIDVDDNLERSKV 100
BSNT_02462___ 101 ETIKYSVAQALKNDRYGANAVVIADPDTVGRLREMSREISEGHPVTGILD 150
|:|||:||||||||.|||||||:||||||.|||.|..:|..|.||:||||
RBAM_014660__ 101 ESIKYTVAQALKNDPYGANAVVVADPDTVSRLRGMGSDIKAGRPVSGILD 150
BSNT_02462___ 151 ELAAIVGRVLPEVPNDVIDNEDEPQTKQQNDQLNRKQQQEMEKEQNDQSD 200
|||||||||:|||||||.|||.|..|:..:||||::.|.:::.|||||||
RBAM_014660__ 151 ELAAIVGRVMPEVPNDVTDNEKESPTQSNDDQLNQRDQNKLQNEQNDQSD 200
BSNT_02462___ 201 HHMKKNNND 209
||||...
RBAM_014660__ 201 HHMKNRR-- 207
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