Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02459 and RBAM_014640

See DNA alignment / Visit BSNT_02459 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:12
# Commandline: needle
#    -asequence pep-align/BSNT_02459___ylaH.1.9828.seq
#    -bsequence pep-align/RBAM_014640___ylaH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02459___ylaH-RBAM_014640___ylaH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02459___ylaH-RBAM_014640___ylaH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02459___ylaH
# 2: RBAM_014640___ylaH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 106
# Identity:      88/106 (83.0%)
# Similarity:    94/106 (88.7%)
# Gaps:           1/106 ( 0.9%)
# Score: 442.0
# 
#
#=======================================

BSNT_02459___      1 MNDVSERLSFFAALYQVDRQPAAGMWLLYGTIFVLAVIVFKLGFAKRLPV     50
                     ||:|||||||||||||||..|..|||||||||.||:||||||||||||||
RBAM_014640__      1 MNEVSERLSFFAALYQVDEHPLTGMWLLYGTIVVLSVIVFKLGFAKRLPV     50

BSNT_02459___     51 LKSAVVYVFLALGCTVLTFLGVFLPVAEGLVVAALILIIYKIRLYQSKKG    100
                     ||:|.||:||.||||||||.||||||.|||||||||||:|||||:||||.
RBAM_014640__     51 LKAAAVYLFLVLGCTVLTFFGVFLPVGEGLVVAALILIVYKIRLHQSKKS    100

BSNT_02459___    101 QSAKS-    105
                     ||||. 
RBAM_014640__    101 QSAKPQ    106


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