Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02459 and RBAM_014640

See Amino acid alignment / Visit BSNT_02459 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:12
# Commandline: needle
#    -asequence dna-align/BSNT_02459___ylaH.1.9828.seq
#    -bsequence dna-align/RBAM_014640___ylaH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02459___ylaH-RBAM_014640___ylaH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02459___ylaH-RBAM_014640___ylaH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02459___ylaH
# 2: RBAM_014640___ylaH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 322
# Identity:     242/322 (75.2%)
# Similarity:   242/322 (75.2%)
# Gaps:           5/322 ( 1.6%)
# Score: 879.0
# 
#
#=======================================

BSNT_02459___      1 TTGAATGACGTAAGCGAACGCCTGTCGTTCTTCGCCGCTCTATATCAAGT     50
                     ||||||||.|||||.|||||.|||||||||||.||.|||||.||.|||||
RBAM_014640__      1 TTGAATGAAGTAAGTGAACGGCTGTCGTTCTTTGCGGCTCTTTACCAAGT     50

BSNT_02459___     51 AGACCGGCAGCCTGC-GGCAGGCATGTGGCTGCTGTACGGCACGATTTTT     99
                     .||...|||.|| || |.|.||.|||||||||.|.|||||.|||||..|.
RBAM_014640__     51 GGATGAGCATCC-GCTGACGGGAATGTGGCTGTTATACGGAACGATCGTC     99

BSNT_02459___    100 GTGTTGGCCGTTATTGTATTTAAGCTTGGATTTGCTAAACGGCTTCCTGT    149
                     |||.|..|.||.|||||||||||.||.||.|||||.||||||||.||.||
RBAM_014640__    100 GTGCTTTCGGTGATTGTATTTAAACTCGGCTTTGCCAAACGGCTGCCGGT    149

BSNT_02459___    150 ATTAAAATCTGCAGTGGTGTATGTATTTTTGGCTTTGGGCTGCACTGTTT    199
                     .||.||..||||.|..||.|||.|.|||.|.|...|.||||||||.||..
RBAM_014640__    150 GTTGAAGGCTGCGGCAGTTTATCTCTTTCTCGTGCTCGGCTGCACCGTAC    199

BSNT_02459___    200 TGACTTTTTTAGGGGTGTTTTTGCCCGTGGCAGAAGGATTGGTCGTCGCT    249
                     ||||||||||.||.||||||.||||.||.|.||||||..|.||.|||||.
RBAM_014640__    200 TGACTTTTTTCGGTGTGTTTCTGCCGGTCGGAGAAGGGCTTGTTGTCGCC    249

BSNT_02459___    250 GCGCTGATTTTAATCATTTACAAAATCCGGCTGTATCAGTCGAAAAAAGG    299
                     ||..|||||||.|||.|||||||||||||.|||.|.|||||.||||||.|
RBAM_014640__    250 GCCTTGATTTTGATCGTTTACAAAATCCGTCTGCACCAGTCCAAAAAAAG    299

BSNT_02459___    300 ACAGTCTGCAAAATC---ATAA    318
                     .|||||.||.|||.|   ||||
RBAM_014640__    300 CCAGTCAGCTAAACCGCAATAA    321


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