Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02459 and RBAM_014640
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:12
# Commandline: needle
# -asequence dna-align/BSNT_02459___ylaH.1.9828.seq
# -bsequence dna-align/RBAM_014640___ylaH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02459___ylaH-RBAM_014640___ylaH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02459___ylaH-RBAM_014640___ylaH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02459___ylaH
# 2: RBAM_014640___ylaH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 322
# Identity: 242/322 (75.2%)
# Similarity: 242/322 (75.2%)
# Gaps: 5/322 ( 1.6%)
# Score: 879.0
#
#
#=======================================
BSNT_02459___ 1 TTGAATGACGTAAGCGAACGCCTGTCGTTCTTCGCCGCTCTATATCAAGT 50
||||||||.|||||.|||||.|||||||||||.||.|||||.||.|||||
RBAM_014640__ 1 TTGAATGAAGTAAGTGAACGGCTGTCGTTCTTTGCGGCTCTTTACCAAGT 50
BSNT_02459___ 51 AGACCGGCAGCCTGC-GGCAGGCATGTGGCTGCTGTACGGCACGATTTTT 99
.||...|||.|| || |.|.||.|||||||||.|.|||||.|||||..|.
RBAM_014640__ 51 GGATGAGCATCC-GCTGACGGGAATGTGGCTGTTATACGGAACGATCGTC 99
BSNT_02459___ 100 GTGTTGGCCGTTATTGTATTTAAGCTTGGATTTGCTAAACGGCTTCCTGT 149
|||.|..|.||.|||||||||||.||.||.|||||.||||||||.||.||
RBAM_014640__ 100 GTGCTTTCGGTGATTGTATTTAAACTCGGCTTTGCCAAACGGCTGCCGGT 149
BSNT_02459___ 150 ATTAAAATCTGCAGTGGTGTATGTATTTTTGGCTTTGGGCTGCACTGTTT 199
.||.||..||||.|..||.|||.|.|||.|.|...|.||||||||.||..
RBAM_014640__ 150 GTTGAAGGCTGCGGCAGTTTATCTCTTTCTCGTGCTCGGCTGCACCGTAC 199
BSNT_02459___ 200 TGACTTTTTTAGGGGTGTTTTTGCCCGTGGCAGAAGGATTGGTCGTCGCT 249
||||||||||.||.||||||.||||.||.|.||||||..|.||.|||||.
RBAM_014640__ 200 TGACTTTTTTCGGTGTGTTTCTGCCGGTCGGAGAAGGGCTTGTTGTCGCC 249
BSNT_02459___ 250 GCGCTGATTTTAATCATTTACAAAATCCGGCTGTATCAGTCGAAAAAAGG 299
||..|||||||.|||.|||||||||||||.|||.|.|||||.||||||.|
RBAM_014640__ 250 GCCTTGATTTTGATCGTTTACAAAATCCGTCTGCACCAGTCCAAAAAAAG 299
BSNT_02459___ 300 ACAGTCTGCAAAATC---ATAA 318
.|||||.||.|||.| ||||
RBAM_014640__ 300 CCAGTCAGCTAAACCGCAATAA 321
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