Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02456 and RBAM_014620

See DNA alignment / Visit BSNT_02456 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:11
# Commandline: needle
#    -asequence pep-align/BSNT_02456___ylaF.1.9828.seq
#    -bsequence pep-align/RBAM_014620___ylaF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02456___ylaF-RBAM_014620___ylaF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02456___ylaF-RBAM_014620___ylaF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02456___ylaF
# 2: RBAM_014620___ylaF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 62
# Identity:      52/62 (83.9%)
# Similarity:    56/62 (90.3%)
# Gaps:           0/62 ( 0.0%)
# Score: 250.0
# 
#
#=======================================

BSNT_02456___      1 MKKMNWLLLLFAFAAVFSIMLIGVFIAEKSPAGIIASIVLVCAVMGGGFT     50
                     |||:||||||||||||||:|||||.|||||..|||.|||||.|:||.|||
RBAM_014620__      1 MKKLNWLLLLFAFAAVFSMMLIGVSIAEKSAWGIIGSIVLVIAMMGSGFT     50

BSNT_02456___     51 LKKKMREQGLLD     62
                     :|||||||||||
RBAM_014620__     51 VKKKMREQGLLD     62


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