Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02456 and RBAM_014620
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:11
# Commandline: needle
# -asequence dna-align/BSNT_02456___ylaF.1.9828.seq
# -bsequence dna-align/RBAM_014620___ylaF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02456___ylaF-RBAM_014620___ylaF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02456___ylaF-RBAM_014620___ylaF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02456___ylaF
# 2: RBAM_014620___ylaF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 192
# Identity: 154/192 (80.2%)
# Similarity: 154/192 (80.2%)
# Gaps: 6/192 ( 3.1%)
# Score: 620.0
#
#
#=======================================
BSNT_02456___ 1 ATGAAAAAAATGAATTGGCTTTTACTATTATTTGCATTTGCAGCGGTTTT 50
|||||||||.||||||||||.|||.|||||||||||||.|||||.||.||
RBAM_014620__ 1 ATGAAAAAATTGAATTGGCTCTTATTATTATTTGCATTCGCAGCAGTCTT 50
BSNT_02456___ 51 CAGCATTATGCTGATCGGCGTCTTTATCGCTGAAAAAAGCCCTGCA---G 97
||||||.||||||||||||||.|..||||||||.|||||| ||| |
RBAM_014620__ 51 CAGCATGATGCTGATCGGCGTATCAATCGCTGAGAAAAGC---GCATGGG 97
BSNT_02456___ 98 GCATTATCGCCAGCATTGTACTTGTTTGCGCTGTCATGGGCGGCGGATTT 147
||||.||||..||||||||.||.|||..|||..|.|||||..||||.||.
RBAM_014620__ 98 GCATCATCGGAAGCATTGTTCTCGTTATCGCCATGATGGGAAGCGGTTTC 147
BSNT_02456___ 148 ACATTAAAAAAGAAAATGCGCGAACAAGGCTTGCTTGATTAA 189
||..||||.||.||||||||||||||.||..|||||||||||
RBAM_014620__ 148 ACCGTAAAGAAAAAAATGCGCGAACAGGGACTGCTTGATTAA 189
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