Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_02455 and RBAM_014610

See DNA alignment / Visit BSNT_02455 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:11
# Commandline: needle
#    -asequence pep-align/BSNT_02455___ylaE.1.9828.seq
#    -bsequence pep-align/RBAM_014610___ylaE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02455___ylaE-RBAM_014610___ylaE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02455___ylaE-RBAM_014610___ylaE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02455___ylaE
# 2: RBAM_014610___ylaE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 205
# Identity:     106/205 (51.7%)
# Similarity:   141/205 (68.8%)
# Gaps:           2/205 ( 1.0%)
# Score: 511.0
# 
#
#=======================================

BSNT_02455___      1 MKKTFVKKAMLTTAAMTSAALLTFGP-DAASAKTPVDNTAVQLQHQA-ST     48
                     ||.:|:||..:|.||..|||||.|.| |:|.|||...|....||..| .|
RBAM_014610__      1 MKTSFLKKTAVTAAATASAALLAFSPLDSAGAKTIQANEPHVLQASAEKT     50

BSNT_02455___     49 NEDLNTFIDILNQCIYEQDGVYYFDSEKAVELGMTKEEAQVIATLWESTS     98
                     .||....|||::|.|||:|||||||.|||||||:.:|:||:|..||:|::
RBAM_014610__     51 PEDAAKLIDIISQSIYEKDGVYYFDGEKAVELGLDQEQAQIIQKLWDSST    100

BSNT_02455___     99 EFFSIVSQCVYLEDGNYKFDTEKAVELGFTEKEALALEQFFSAVSLKIHI    148
                     ||.:::|||:...||.|.|:.||||||||||||||.::|.|:|.|..:||
RBAM_014610__    101 EFLTVLSQCIEKTDGEYTFNKEKAVELGFTEKEALIVDQLFTAFSQSLHI    150

BSNT_02455___    149 LQAAIVLQDDVYSYDKDAALQAGATPLQADVYEKLFSALSQEQLAAIYDM    198
                     ||:|::.:|.||::|:|.|.:|||...:|.:....|::|.||.|..||..
RBAM_014610__    151 LQSALIEEDGVYTFDQDLAEKAGAGKKEAKLCAGFFNSLPQELLEGIYTA    200

BSNT_02455___    199 IHPQA    203
                     .||..
RBAM_014610__    201 FHPAE    205


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.