Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02455 and RBAM_014610
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:11
# Commandline: needle
# -asequence dna-align/BSNT_02455___ylaE.1.9828.seq
# -bsequence dna-align/RBAM_014610___ylaE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02455___ylaE-RBAM_014610___ylaE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02455___ylaE-RBAM_014610___ylaE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02455___ylaE
# 2: RBAM_014610___ylaE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 670
# Identity: 420/670 (62.7%)
# Similarity: 420/670 (62.7%)
# Gaps: 110/670 (16.4%)
# Score: 1116.0
#
#
#=======================================
BSNT_02455___ 1 ATGAAGAAAACA-----TTTGTAAAAAAAGCTATGTTAACGACTGCCGCA 45
|.||||||| |||| ||.||||.|..|| ||||..|.||||||
RBAM_014610__ 1 ---ATGAAAACATCTTTTTTG-AAGAAAACCGCTG-TAACTGCCGCCGCA 45
BSNT_02455___ 46 ATGACCTCAGCTGCTCTATTAACGTTCGGTCC---TGATGCAGCCAGCGC 92
|...|||||||.||..|..|..|.|||.|||| ||||.|.|||.||||
RBAM_014610__ 46 ACCGCCTCAGCCGCCTTGCTTGCATTCAGTCCGCTTGATTCTGCCGGCGC 95
BSNT_02455___ 93 AAAAAC---ACCGGTTGATAACACTGC-TGTTCAACTCCA-GCATCAGGC 137
|||||| .|.||...||.| ||.|| ||| .||.|| ||.||.|..
RBAM_014610__ 96 AAAAACGATTCAGGCAAATGA-ACCGCATGT---CCTGCAGGCTTCCGCT 141
BSNT_02455___ 138 GAGCACTAAC----GAAGATC---TCAATACATTCATTGATATATTAAAT 180
|||.| ||| ||||| | .|||.|| |||||||.||..|.|..
RBAM_014610__ 142 GAGAA--AACACCGGAAGA-CGCGGCAAAAC--TCATTGACATCATCAGC 186
BSNT_02455___ 181 CAATGTATTTACGAACAAGACGGTGTATATTATTTTGACAGCGAAAAAGC 230
||||..|||||||||.||||||||||.||||||||||||.|.||||||||
RBAM_014610__ 187 CAATCGATTTACGAAAAAGACGGTGTCTATTATTTTGACGGTGAAAAAGC 236
BSNT_02455___ 231 TGTCGAGTTAGGAAT-GA-CAAAAGAAGAGGCTCAGGTAATTGCTACA-C 277
.||.||.||.|||.| || | |||||.|.||.|||.|.||| |.|.| |
RBAM_014610__ 237 GGTTGAATTGGGATTAGATC--AAGAACAAGCCCAGATCATT-CAAAAGC 283
BSNT_02455___ 278 TCTGGGAATCGACA--TCA---GAATTTTTCAGCATTGTTTCACAATGTG 322
|.||| |||| ||| ||||||||.|.|.|..||||.|||
RBAM_014610__ 284 TGTGG-----GACAGTTCAACCGAATTTTTAACCGTACTTTCCCAA---- 324
BSNT_02455___ 323 TGTATCTCGA----GGATGGAAATTACAAATTTGATACAGAAAAAGCAGT 368
|||||...|| |||.||..|.||.|.||||.|||.|||||||||.||
RBAM_014610__ 325 TGTATTGAGAAAACGGACGGCGAATATACATTTAATAAAGAAAAAGCGGT 374
BSNT_02455___ 369 TGAACTTGGCTTCACAGAAAAAGAAGCACTTGCACTTGAACAATTTTTCT 418
.||.||.|||||.||.||||||||.||.|||....||||.||..|.|||.
RBAM_014610__ 375 GGAGCTCGGCTTTACGGAAAAAGAGGCCCTTATCGTTGATCAGCTGTTCA 424
BSNT_02455___ 419 CCGCTGTTTCTCTCAAG-ATTCACATTCTTCAA---GCAGCCATTGTGCT 464
|||||.|||| |..||| .||||.||.|||||| |||...|||| .
RBAM_014610__ 425 CCGCTTTTTC-CCAAAGTCTTCATATCCTTCAATCTGCACTGATTG---A 470
BSNT_02455___ 465 ACAAGATGATGTGTACAGCTATGATAAAGACGCAGC--GCT--ACAAGCA 510
|.||||.|.||||||.|..|.||||.|.||| | ||| |.|||||
RBAM_014610__ 471 AGAAGACGGTGTGTATACGTTTGATCAGGAC----CTTGCTGAAAAAGCA 516
BSNT_02455___ 511 GGTGCA----------ACGCCACTGCAAGCTGACGTTTATGAAAAACTCT 550
||.||| |.|| .|||||| |.||....|.|||
RBAM_014610__ 517 GGAGCAGGAAAAAAAGAAGC-----AAAGCTG-----TGTGCCGGATTCT 556
BSNT_02455___ 551 TCAGTGCCCTGTCACAAGAACAGCTTGCCGCTATTTACGATA-----TGA 595
|.|.|.|.|||.|.||.|||..|||||..|..|||| ||| |
RBAM_014610__ 557 TTAATTCACTGCCCCAGGAATTGCTTGAAGGCATTT---ATACAGCCT-- 601
BSNT_02455___ 596 TTCATCCCCAGGCT---TAA 612
||||||| |||| |||
RBAM_014610__ 602 TTCATCC---GGCTGAGTAA 618
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