Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02453 and RBAM_014590

See DNA alignment / Visit BSNT_02453 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:11
# Commandline: needle
#    -asequence pep-align/BSNT_02453.1.9828.seq
#    -bsequence pep-align/RBAM_014590___ylaC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02453-RBAM_014590___ylaC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02453-RBAM_014590___ylaC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02453
# 2: RBAM_014590___ylaC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 173
# Identity:      54/173 (31.2%)
# Similarity:    79/173 (45.7%)
# Gaps:          70/173 (40.5%)
# Score: 283.0
# 
#
#=======================================

BSNT_02453         0 --------------------------------------------------      0
                                                                       
RBAM_014590__      1 MKNKMSIEQLYREHYQDIMYYLYRRTHHAETAKDLAQDTFMKAFNGLDSF     50

BSNT_02453         1 --------------------MVPKGCQYQFTEISKNEGLTQTTYDQPEQY     30
                                         ...:..:|||::|:.||||.||||:.||.|
RBAM_014590__     51 KGHSSIRTWLYAIAHHTFINWYRRDRKYQFSDITLNEGLQQTTYELPEHY    100

BSNT_02453        31 LSRTVKSETLRQELLKLKDQHQSVLILREFQELSYEEIAEILGWSLSKVK     80
                     ::||.....|..::.:||...|:||||||||||||||||::|.|||||||
RBAM_014590__    101 VARTDTQNALTGQIQRLKSDQQTVLILREFQELSYEEIADVLDWSLSKVK    150

BSNT_02453        81 TTLHRARLELKKNMTKSREEERI    103
                     :||:|||::||:::.:.|::.:|
RBAM_014590__    151 STLYRARMQLKQHLAEKRKDGQI    173


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